* install options are ' --no-html' * installing *source* package 'AMORE' ... ** libs ** arch - i386 gcc-4.2 -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -I/usr/local/include -fPIC -mtune=core2 -g -O2 -c ADAPTgd.c -o ADAPTgd.o gcc-4.2 -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -I/usr/local/include -fPIC -mtune=core2 -g -O2 -c ADAPTgdwm.c -o ADAPTgdwm.o gcc-4.2 -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -I/usr/local/include -fPIC -mtune=core2 -g -O2 -c BATCHgd.c -o BATCHgd.o gcc-4.2 -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -I/usr/local/include -fPIC -mtune=core2 -g -O2 -c BATCHgdwm.c -o BATCHgdwm.o gcc-4.2 -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -I/usr/local/include -fPIC -mtune=core2 -g -O2 -c copynet.c -o copynet.o gcc-4.2 -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -I/usr/local/include -fPIC -mtune=core2 -g -O2 -c sim.c -o sim.o gcc-4.2 -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o AMORE.so ADAPTgd.o ADAPTgdwm.o BATCHgd.o BATCHgdwm.o copynet.o sim.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation ** arch - ppc gcc-4.2 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -fPIC -g -O2 -c ADAPTgd.c -o ADAPTgd.o gcc-4.2 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -fPIC -g -O2 -c ADAPTgdwm.c -o ADAPTgdwm.o gcc-4.2 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -fPIC -g -O2 -c BATCHgd.c -o BATCHgd.o gcc-4.2 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -fPIC -g -O2 -c BATCHgdwm.c -o BATCHgdwm.o gcc-4.2 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -fPIC -g -O2 -c copynet.c -o copynet.o gcc-4.2 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -fPIC -g -O2 -c sim.c -o sim.o gcc-4.2 -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o AMORE.so ADAPTgd.o ADAPTgdwm.o BATCHgd.o BATCHgdwm.o copynet.o sim.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation ** arch - ppc64 gcc-4.2 -arch ppc64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc64 -I/usr/local/include -fPIC -g -O2 -c ADAPTgd.c -o ADAPTgd.o gcc-4.2 -arch ppc64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc64 -I/usr/local/include -fPIC -g -O2 -c ADAPTgdwm.c -o ADAPTgdwm.o gcc-4.2 -arch ppc64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc64 -I/usr/local/include -fPIC -g -O2 -c BATCHgd.c -o BATCHgd.o gcc-4.2 -arch ppc64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc64 -I/usr/local/include -fPIC -g -O2 -c BATCHgdwm.c -o BATCHgdwm.o gcc-4.2 -arch ppc64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc64 -I/usr/local/include -fPIC -g -O2 -c copynet.c -o copynet.o gcc-4.2 -arch ppc64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc64 -I/usr/local/include -fPIC -g -O2 -c sim.c -o sim.o gcc-4.2 -arch ppc64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o AMORE.so ADAPTgd.o ADAPTgdwm.o BATCHgd.o BATCHgdwm.o copynet.o sim.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation ** arch - x86_64 gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -I/usr/local/include -fPIC -mtune=core2 -g -O2 -c ADAPTgd.c -o ADAPTgd.o gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -I/usr/local/include -fPIC -mtune=core2 -g -O2 -c ADAPTgdwm.c -o ADAPTgdwm.o gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -I/usr/local/include -fPIC -mtune=core2 -g -O2 -c BATCHgd.c -o BATCHgd.o gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -I/usr/local/include -fPIC -mtune=core2 -g -O2 -c BATCHgdwm.c -o BATCHgdwm.o gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -I/usr/local/include -fPIC -mtune=core2 -g -O2 -c copynet.c -o copynet.o gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/x86_64 -I/usr/local/include -fPIC -mtune=core2 -g -O2 -c sim.c -o sim.o gcc-4.2 -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o AMORE.so ADAPTgd.o ADAPTgdwm.o BATCHgd.o BATCHgdwm.o copynet.o sim.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation ** R ** preparing package for lazy loading ** help Warning: ./man/deltaE.Rd:12: unknown macro '\item' Warning: ./man/deltaE.Rd:13: unknown macro '\item' Warning: ./man/deltaE.Rd:14: unknown macro '\item' Warning: ./man/deltaE.Rd:28: unknown macro '\item' Warning: ./man/deltaE.Rd:29: unknown macro '\item' Warning: ./man/deltaE.Rd:30: unknown macro '\item' Warning: bad markup (extra space?) at init.MLPneuron.Rd:14:12 *** installing help indices ** building package indices ... * DONE (AMORE)