• using R version 2.14.1 Patched (2012-02-04 r58267)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘tsDyn/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘tsDyn’ version ‘0.7-62’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking whether package ‘tsDyn’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  outputDialog: warning in assign("nlarModel", res, env = .GlobalEnv):
  partial argument match of 'env' to 'envir'
  plot.TVECMHanSeo02Test: warning in legend("bottomleft", lty = 2, col =
  3:5, leg = c("0.90%", "0.95%", "0.99%"), horiz = TRUE, title = tit,
  bty = "n"): partial argument match of 'leg' to 'legend'
  plot.TVECMHanSeo02Test: warning in legend("topleft", lty = c(1, 2, 2,
  2), col = 2:5, leg = c("Test value", "0.90% cv", "0.95% cv", "0.99%
  cv"), bty = "n"): partial argument match of 'leg' to 'legend'
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking compiled code ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking examples ... OK
• checking for unstated dependencies in tests ... OK
• checking tests ... OK
  Running ‘00SetarAndFriends.R’
  Comparing ‘00SetarAndFriends.Rout’ to ‘00SetarAndFriends.Rout.save’ ...1a2,19
  > R version 2.11.1 (2010-05-31)
  > Copyright (C) 2010 The R Foundation for Statistical Computing
  > ISBN 3-900051-07-0
  >
  > R est un logiciel libre livré sans AUCUNE GARANTIE.
  > Vous pouvez le redistribuer sous certaines conditions.
  > Tapez 'license()' ou 'licence()' pour plus de détails.
  >
  > R est un projet collaboratif avec de nombreux contributeurs.
  > Tapez 'contributors()' pour plus d'information et
  > 'citation()' pour la façon de le citer dans les publications.
  >
  > Tapez 'demo()' pour des démonstrations, 'help()' pour l'aide
  > en ligne ou 'help.start()' pour obtenir l'aide au format HTML.
  > Tapez 'q()' pour quitter R.
  >
  > REvolution R enhancements not installed. For improved
  > performance and other extensions: apt-get install revolution-r
  4c22
  < This is mgcv 1.7-13. For overview type 'help("mgcv-package")'.
  ---
  > This is mgcv 1.6-2. For overview type 'help("mgcv-package")'.
  571,576c589,594
  < 95 -0.13264030 0.09671450
  < 96 0.12582712 -0.28920157
  < 97 0.17823756 0.04344887
  < 98 -0.15492010 -0.08167471
  < 99 0.09760711 0.15553665
  < 100 0.31886073 0.01232640
  ---
  > 95 -0.1326403 0.09671450
  > 96 0.1258271 -0.28920157
  > 97 0.1782376 0.04344887
  > 98 -0.1549201 -0.08167471
  > 99 0.0976071 0.15553665
  > 100 0.3188607 0.01232640
  723,724c741
  < Percentage of Observations in each regime: 71.4% 10.2% 18.4%
  < >
  ---
  > Percentage of Observations in each regime: 71.4% 10.2% 18.4%>
  759,760c776
  < Percentage of Observations in each regime: 71.4% 10.2% 18.4%
  < >
  ---
  > Percentage of Observations in each regime: 71.4% 10.2% 18.4%>
  794,795c810
  < Percentage of Observations in each regime: 71.4% 10.2% 18.4%
  < >
  ---
  > Percentage of Observations in each regime: 71.4% 10.2% 18.4%>
  Running ‘TVECM_HSTEST.R’
  Comparing ‘TVECM_HSTEST.Rout’ to ‘TVECM_HSTEST.Rout.save’ ...1a2,19
  > R version 2.11.1 (2010-05-31)
  > Copyright (C) 2010 The R Foundation for Statistical Computing
  > ISBN 3-900051-07-0
  >
  > R est un logiciel libre livré sans AUCUNE GARANTIE.
  > Vous pouvez le redistribuer sous certaines conditions.
  > Tapez 'license()' ou 'licence()' pour plus de détails.
  >
  > R est un projet collaboratif avec de nombreux contributeurs.
  > Tapez 'contributors()' pour plus d'information et
  > 'citation()' pour la façon de le citer dans les publications.
  >
  > Tapez 'demo()' pour des démonstrations, 'help()' pour l'aide
  > en ligne ou 'help.start()' pour obtenir l'aide au format HTML.
  > Tapez 'q()' pour quitter R.
  >
  > REvolution R enhancements not installed. For improved
  > performance and other extensions: apt-get install revolution-r
  4c22
  < This is mgcv 1.7-13. For overview type 'help("mgcv-package")'.
  ---
  > This is mgcv 1.6-2. For overview type 'help("mgcv-package")'.
  34c52
  < Test Statistic: 18.2336 (Maximized for threshold value: -0.1002829 )
  ---
  > Test Statistic: 18.23360 (Maximized for threshold value: -0.1002829 )
  63c81
  < Test Statistic: 18.2336 (Maximized for threshold value: -0.1002829 )
  ---
  > Test Statistic: 18.23360 (Maximized for threshold value: -0.1002829 )
  89c107
  < Test Statistic: 18.2336 (Maximized for threshold value: -0.1002829 )
  ---
  > Test Statistic: 18.23360 (Maximized for threshold value: -0.1002829 )
  94c112
  < Test Statistic: 18.2336 (Maximized for threshold value: -0.1002829 )
  ---
  > Test Statistic: 18.23360 (Maximized for threshold value: -0.1002829 )
  99c117
  < 15.1108 15.1244 15.13527
  ---
  > 15.1108 15.12440 15.13527
  113c131
  < 15.1108 15.1244 15.13527
  ---
  > 15.1108 15.12440 15.13527
  Running ‘VECM.R’
  Comparing ‘VECM.Rout’ to ‘VECM.Rout.save’ ...1a2,21
  > R version 2.11.1 (2010-05-31)
  > Copyright (C) 2010 The R Foundation for Statistical Computing
  > ISBN 3-900051-07-0
  >
  > R est un logiciel libre livré sans AUCUNE GARANTIE.
  > Vous pouvez le redistribuer sous certaines conditions.
  > Tapez 'license()' ou 'licence()' pour plus de détails.
  >
  > R est un projet collaboratif avec de nombreux contributeurs.
  > Tapez 'contributors()' pour plus d'information et
  > 'citation()' pour la façon de le citer dans les publications.
  >
  > Tapez 'demo()' pour des démonstrations, 'help()' pour l'aide
  > en ligne ou 'help.start()' pour obtenir l'aide au format HTML.
  > Tapez 'q()' pour quitter R.
  >
  > REvolution R enhancements not installed. For improved
  > performance and other extensions: apt-get install revolution-r
  >
  > [Previously saved workspace restored]
  4c24
  < This is mgcv 1.7-13. For overview type 'help("mgcv-package")'.
  ---
  > This is mgcv 1.6-2. For overview type 'help("mgcv-package")'.
  180,186d199
  <
  < Attaching package: 'zoo'
  <
  < The following object(s) are masked from 'package:base':
  <
  < as.Date, as.Date.numeric
  <
  201c214
  < [1] -73607.49
  ---
  > [1] -73607.5
  Running ‘lstar.R’
  Comparing ‘lstar.Rout’ to ‘lstar.Rout.save’ ...1a2,20
  > R version 2.13.0 (2011-04-13)
  > Copyright (C) 2011 The R Foundation for Statistical Computing
  > ISBN 3-900051-07-0
  > Platform: x86_64-pc-linux-gnu (64-bit)
  >
  > R est un logiciel libre livré sans AUCUNE GARANTIE.
  > Vous pouvez le redistribuer sous certaines conditions.
  > Tapez 'license()' ou 'licence()' pour plus de détails.
  >
  > R est un projet collaboratif avec de nombreux contributeurs.
  > Tapez 'contributors()' pour plus d'information et
  > 'citation()' pour la façon de le citer dans les publications.
  >
  > Tapez 'demo()' pour des démonstrations, 'help()' pour l'aide
  > en ligne ou 'help.start()' pour obtenir l'aide au format HTML.
  > Tapez 'q()' pour quitter R.
  >
  > REvolution R enhancements not installed. For improved
  > performance and other extensions: apt-get install revolution-r
  4c23
  < This is mgcv 1.7-13. For overview type 'help("mgcv-package")'.
  ---
  > This is mgcv 1.7-6. For overview type 'help("mgcv-package")'.
  10a30,36
  >
  >
  > Attaching package: 'snow'
  >
  > The following object(s) are masked from 'package:base':
  >
  > enquote
  Running ‘regime.R’
  Running ‘toMlm.R’
  Comparing ‘toMlm.Rout’ to ‘toMlm.Rout.save’ ...1a2,21
  > R version 2.11.1 (2010-05-31)
  > Copyright (C) 2010 The R Foundation for Statistical Computing
  > ISBN 3-900051-07-0
  >
  > R est un logiciel libre livré sans AUCUNE GARANTIE.
  > Vous pouvez le redistribuer sous certaines conditions.
  > Tapez 'license()' ou 'licence()' pour plus de détails.
  >
  > R est un projet collaboratif avec de nombreux contributeurs.
  > Tapez 'contributors()' pour plus d'information et
  > 'citation()' pour la façon de le citer dans les publications.
  >
  > Tapez 'demo()' pour des démonstrations, 'help()' pour l'aide
  > en ligne ou 'help.start()' pour obtenir l'aide au format HTML.
  > Tapez 'q()' pour quitter R.
  >
  > REvolution R enhancements not installed. For improved
  > performance and other extensions: apt-get install revolution-r
  >
  > [Previously saved workspace restored]
  4c24
  < This is mgcv 1.7-13. For overview type 'help("mgcv-package")'.
  ---
  > This is mgcv 1.6-2. For overview type 'help("mgcv-package")'.
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... OK
• checking re-building of vignette PDFs ... OK
• checking PDF version of manual ... OK