• using R version 2.9.1 Patched (2009-07-02 r48890)
• using session charset: UTF-8
• checking for file 'simba/DESCRIPTION' ... OK
• checking extension type ... Package
• this is package 'simba' version '0.2-5'
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking whether package 'simba' can be installed ... WARNING
  Found the following significant warnings:
  Warning: unmatched right brace in file 'sim.yo.Rd' on line 57
  Warning: unmatched right brace in file 'simba-package.Rd' on line 48
  See http://www.r-project.org/nosvn/R.check/r-patched-linux-x86_64/simba-00install.html for details.
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... NOTE
  Non-standard license specification:
  GPL version 2
  Standardizable: TRUE
  Standardized license specification:
  GPL-2
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  occ.time: no visible binding for global variable ‘listin’
  plot.diffmich: no visible binding for global variable ‘perm’
  plot.dmn: no visible binding for global variable ‘perm’
  sim.yo: no visible binding for global variable ‘METHODS’
  simn : sia: no visible binding for global variable ‘x’
  Found possibly global 'T' or 'F' in the following function:
  plot.dmn
• checking Rd files ... OK
• checking Rd files against version 2 parser ... WARNING
  Warning: ./man/diffslope.Rd:35: Unnecessary braces at ‘{\link[base]{data.frame}}’
  *** error on file ./man/sim.yo.Rd
  Error in parse_Rd("./man/sim.yo.Rd", encoding = "unknown") :
  ./man/sim.yo.Rd:57:1: unexpected '}'
  56: }
  57: }
  ^
  
  *** error on file ./man/simba-package.Rd
  Error in parse_Rd("./man/simba-package.Rd", encoding = "unknown") :
  ./man/simba-package.Rd:48:1: unexpected '}'
  47: }
  48: }
  ^
  
  problems found in ‘sim.yo.Rd’, ‘simba-package.Rd’
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... NOTE
  S3 methods shown with full name in documentation object 'plot.mrpp':
  plot.mrpp
  
  The \usage entries for S3 methods should use the \method markup and not
  their full name.
  See the chapter 'Writing R documentation files' in manual 'Writing R
  Extensions'.
• checking data for non-ASCII characters ... OK
• checking examples ... OK
• checking PDF version of manual ... OK