• using R version 3.0.1 Patched (2013-05-16 r62757)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘scaleboot/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘scaleboot’ version ‘0.3-3’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘scaleboot’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  read.ass: warning in scan(file, comment = "#", quiet = T): partial
  argument match of 'comment' to 'comment.char'
  read.cnt: warning in scan(file, comment = "#", quiet = T): partial
  argument match of 'comment' to 'comment.char'
  read.mt: warning in scan(file, comment = "#", quiet = T): partial
  argument match of 'comment' to 'comment.char'
  sbfit.default: warning in pchisq(ans$rss, lower = F, df = ans$df):
  partial argument match of 'lower' to 'lower.tail'
  scaleboot.node: warning in sample(nsize, nsize2, rep = T): partial
  argument match of 'rep' to 'replace'
  solvex: warning in eigen(x, sym = T): partial argument match of 'sym'
  to 'symmetric'
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking examples ... [11s/11s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... [23s/23s] OK
• checking re-building of vignette PDFs ... [22s/22s] OK
• checking PDF version of manual ... OK
  NOTE: There was 1 note.
  See
  ‘/home/hornik/tmp/R.check/r-patched-ng/Work/PKGS/scaleboot.Rcheck/00check.log’
  for details.