• using R version 2.14.1 Patched (2012-02-04 r58267)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘rattle/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘rattle’ version ‘2.6.16’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking whether package ‘rattle’ can be installed ... OK
• checking installed package size ... NOTE
  installed size is 5.4Mb
  sub-directories of 1Mb or more:
  data 1.1Mb
  etc 1.9Mb
  po 1.3Mb
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  ada.formula: warning in match.call(expand = FALSE): partial argument
  match of 'expand' to 'expand.dots'
  continueModelAda: warning in deparse(parse(text =
  crs$ada$call)[3][[1]], width = 500): partial argument match of
  'width' to 'width.cutoff'
  executeEvaluateScore: no visible binding for global variable
  ‘rattle.entered.dataset’
  getExportSaveName: no visible global function definition for
  ‘gladeXMLNew’
  ggcorplot: no visible global function definition for ‘aes’
  ggcorplot: no visible binding for global variable ‘rsq’
  ggcorplot: no visible binding for global variable ‘p’
  ggcorplot: no visible binding for global variable ‘x_lab’
  ggcorplot: no visible global function definition for ‘facet_grid’
  ggcorplot: no visible global function definition for ‘opts’
  ggcorplot: no visible global function definition for ‘theme_blank’
  ggcorplot: no visible global function definition for ‘scale_size’
  ggcorplot: no visible global function definition for ‘ggplot’
  list.rule.nodes.rpart: warning in sort(frm$yval2[, 5][frm[, 1] ==
  "<leaf>"], decr = TRUE, index = TRUE): partial argument match of
  'decr' to 'decreasing'
  newPlot: no visible global function definition for ‘gladeXMLNew’
  newPlot: no visible global function definition for
  ‘gladeXMLSignalAutoconnect’
  on_about_menu_activate: no visible global function definition for
  ‘gladeXMLNew’
  on_about_menu_activate: no visible global function definition for
  ‘gladeXMLSignalAutoconnect’
  plotRisk: warning in plotOptimalLine(chosen, ri[chosen.index],
  re[chosen.index], label = chosen.label, col = "grey"): partial
  argument match of 'col' to 'colour'
  rattle: no visible global function definition for ‘gladeXMLNew’
  rattle: no visible global function definition for
  ‘gladeXMLSignalAutoconnect’
  rattleInfo: warning in require(pmml, quiet = TRUE): partial argument
  match of 'quiet' to 'quietly'
  rattleInfo: warning in require(methods, quiet = TRUE): partial argument
  match of 'quiet' to 'quietly'
  rattleInfo: warning in require(colorspace, quiet = TRUE): partial
  argument match of 'quiet' to 'quietly'
  rattleInfo: warning in require(cairoDevice, quiet = TRUE): partial
  argument match of 'quiet' to 'quietly'
  rattleInfo: warning in require(RGtk2, quiet = TRUE): partial argument
  match of 'quiet' to 'quietly'
  rattleInfo: warning in require(utils, quiet = TRUE): partial argument
  match of 'quiet' to 'quietly'
  rattleInfo: warning in require(XML, quiet = TRUE): partial argument
  match of 'quiet' to 'quietly'
  rattleInfo: warning in require(graph, quiet = TRUE, warn.conflicts =
  FALSE): partial argument match of 'quiet' to 'quietly'
  rattleInfo: warning in require(RBGL, quiet = TRUE): partial argument
  match of 'quiet' to 'quietly'
  rattleInfo: warning in require(bitops, quiet = TRUE): partial argument
  match of 'quiet' to 'quietly'
  rattleInfo: warning in require(grid, quiet = TRUE): partial argument
  match of 'quiet' to 'quietly'
  rattleInfo: warning in require(pkgDepTools, quiet = TRUE): partial
  argument match of 'quiet' to 'quietly'
  rattleInfo: no visible global function definition for ‘biocLite’
  rattleInfo: warning in require(Rgraphviz, quiet = TRUE): partial
  argument match of 'quiet' to 'quietly'
  setupDataset: no visible binding for global variable ‘inputs’
  setupDataset: no visible binding for global variable ‘target’
  viewData: no visible global function definition for ‘gladeXMLNew’
  viewData: no visible global function definition for
  ‘gladeXMLSignalAutoconnect’
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking examples ... OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... OK
• checking re-building of vignette PDFs ... OK
• checking PDF version of manual ... OK