- using R version 3.5.0 RC (2018-04-16 r74618)
- using platform: x86_64-pc-linux-gnu (64-bit)
- using session charset: UTF-8
- checking for file ‘lestat/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘lestat’ version ‘1.8’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘lestat’ can be installed ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
cdf.betabinomial cdf.betadistribution cdf.binomialdistribution
cdf.default cdf.discretedistribution cdf.expgamma cdf.fdistribution
cdf.gammadistribution cdf.normal cdf.poissondistribution
cdf.tdistribution cdf.uniformdistribution compose.default
compose.discretedistribution compose.normal
compose.uniformdistribution conditional.binomialbeta
conditional.default conditional.mdiscretedistribution
conditional.mnormal conditional.mnormalexpgamma
conditional.mnormalgamma conditional.mtdistribution
conditional.muniformdistribution conditional.normalexpgamma
conditional.normalgamma contrast.default contrast.mnormalexpgamma
contrast.mnormalgamma credibilityinterval.betadistribution
credibilityinterval.default credibilityinterval.expgamma
credibilityinterval.fdistribution
credibilityinterval.gammadistribution credibilityinterval.normal
credibilityinterval.tdistribution difference.default
difference.normal difference.tdistribution expectation.betabinomial
expectation.betadistribution expectation.binomialdistribution
expectation.default expectation.discretedistribution
expectation.expgamma expectation.fdistribution
expectation.gammadistribution expectation.mdiscretedistribution
expectation.mnormal expectation.mnormalexpgamma
expectation.mnormalgamma expectation.mtdistribution
expectation.muniformdistribution expectation.normal
expectation.normalexpgamma expectation.normalgamma
expectation.poissondistribution expectation.tdistribution
expectation.uniformdistribution invcdf.betadistribution
invcdf.binomialdistribution invcdf.default
invcdf.discretedistribution invcdf.expgamma invcdf.fdistribution
invcdf.gammadistribution invcdf.normal invcdf.poissondistribution
invcdf.tdistribution invcdf.uniformdistribution linearpredict.default
linearpredict.mnormal linearpredict.mnormalexpgamma
linearpredict.mnormalgamma linearpredict.normal
linearpredict.normalexpgamma linearpredict.normalgamma
marginal.binomialbeta marginal.default marginal.mdiscretedistribution
marginal.mnormal marginal.mnormalexpgamma marginal.mnormalgamma
marginal.mtdistribution marginal.muniformdistribution
marginal.normalexpgamma marginal.normalgamma p.value.default
p.value.expgamma p.value.fdistribution p.value.gammadistribution
p.value.mnormal p.value.mtdistribution p.value.normal
p.value.tdistribution precision.betabinomial
precision.betadistribution precision.binomialdistribution
precision.default precision.discretedistribution precision.expgamma
precision.fdistribution precision.gammadistribution
precision.mdiscretedistribution precision.mnormal
precision.mnormalexpgamma precision.mnormalgamma
precision.mtdistribution precision.muniformdistribution
precision.normal precision.normalexpgamma precision.normalgamma
precision.poissondistribution precision.tdistribution
precision.uniformdistribution probability.betabinomial
probability.binomialdistribution probability.default
probability.discretedistribution probability.mdiscretedistribution
probability.poissondistribution probabilitydensity.betadistribution
probabilitydensity.default probabilitydensity.expgamma
probabilitydensity.fdistribution probabilitydensity.gammadistribution
probabilitydensity.mnormal probabilitydensity.mnormalexpgamma
probabilitydensity.mnormalgamma probabilitydensity.mtdistribution
probabilitydensity.muniformdistribution probabilitydensity.normal
probabilitydensity.normalexpgamma probabilitydensity.normalgamma
probabilitydensity.tdistribution
probabilitydensity.uniformdistribution variance.betabinomial
variance.betadistribution variance.binomialdistribution
variance.default variance.discretedistribution variance.expgamma
variance.fdistribution variance.gammadistribution
variance.mdiscretedistribution variance.mnormal
variance.mnormalexpgamma variance.mnormalgamma
variance.mtdistribution variance.muniformdistribution variance.normal
variance.normalexpgamma variance.normalgamma
variance.poissondistribution variance.tdistribution
variance.uniformdistribution
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [12s/17s] NOTE
anovatable: no visible global function definition for ‘pf’
cdf.betadistribution: no visible global function definition for ‘pbeta’
cdf.binomialdistribution: no visible global function definition for
‘pbinom’
cdf.expgamma: no visible global function definition for ‘pgamma’
cdf.fdistribution: no visible global function definition for ‘pf’
cdf.gammadistribution: no visible global function definition for
‘pgamma’
cdf.normal: no visible global function definition for ‘pnorm’
cdf.poissondistribution: no visible global function definition for
‘ppois’
cdf.tdistribution: no visible global function definition for ‘pt’
credibilityinterval.betadistribution: no visible global function
definition for ‘qbeta’
credibilityinterval.fdistribution: no visible global function
definition for ‘qf’
credibilityinterval.gammadistribution: no visible global function
definition for ‘qgamma’
credibilityinterval.normal: no visible global function definition for
‘qnorm’
credibilityinterval.tdistribution: no visible global function
definition for ‘qt’
densitycontour: no visible global function definition for ‘contour’
invcdf.betadistribution: no visible global function definition for
‘qbinom’
invcdf.binomialdistribution: no visible global function definition for
‘qbinom’
invcdf.expgamma: no visible global function definition for ‘qgamma’
invcdf.fdistribution: no visible global function definition for ‘qf’
invcdf.gammadistribution: no visible global function definition for
‘qgamma’
invcdf.normal: no visible global function definition for ‘qnorm’
invcdf.poissondistribution: no visible global function definition for
‘qpois’
invcdf.tdistribution: no visible global function definition for ‘qt’
p.value.expgamma: no visible global function definition for ‘pgamma’
p.value.fdistribution: no visible global function definition for ‘pf’
p.value.gammadistribution: no visible global function definition for
‘pgamma’
p.value.mnormal: no visible global function definition for ‘pchisq’
p.value.mtdistribution: no visible global function definition for ‘pf’
p.value.normal: no visible global function definition for ‘pnorm’
p.value.tdistribution: no visible global function definition for ‘pt’
plot.betabinomial: no visible global function definition for ‘plot’
plot.betadistribution: no visible global function definition for ‘plot’
plot.betadistribution: no visible global function definition for
‘dbeta’
plot.binomialbeta: no visible global function definition for ‘dbeta’
plot.binomialbeta: no visible global function definition for ‘dbinom’
plot.binomialbeta: no visible global function definition for ‘image’
plot.binomialbeta: no visible global function definition for ‘par’
plot.binomialbeta: no visible global function definition for ‘plot’
plot.binomialdistribution: no visible global function definition for
‘plot’
plot.binomialdistribution: no visible global function definition for
‘dbinom’
plot.discretedistribution: no visible global function definition for
‘plot’
plot.discretedistribution: no visible global function definition for
‘text’
plot.expgamma: no visible global function definition for ‘plot’
plot.fdistribution: no visible global function definition for ‘qf’
plot.fdistribution: no visible global function definition for ‘df’
plot.fdistribution: no visible global function definition for ‘plot’
plot.gammadistribution: no visible global function definition for
‘qgamma’
plot.gammadistribution: no visible global function definition for
‘dgamma’
plot.gammadistribution: no visible global function definition for
‘plot’
plot.mdiscretedistribution: no visible global function definition for
‘image’
plot.mdiscretedistribution: no visible global function definition for
‘par’
plot.mdiscretedistribution: no visible global function definition for
‘plot’
plot.mnormal: no visible global function definition for ‘par’
plot.mnormal: no visible global function definition for ‘plot’
plot.mnormalexpgamma: no visible global function definition for ‘par’
plot.mnormalexpgamma: no visible global function definition for ‘plot’
plot.mnormalgamma: no visible global function definition for ‘par’
plot.mnormalgamma: no visible global function definition for ‘plot’
plot.mtdistribution: no visible global function definition for ‘qt’
plot.mtdistribution: no visible global function definition for ‘par’
plot.mtdistribution: no visible global function definition for ‘plot’
plot.muniformdistribution: no visible global function definition for
‘plot’
plot.muniformdistribution: no visible global function definition for
‘lines’
plot.muniformdistribution: no visible global function definition for
‘par’
plot.normal: no visible global function definition for ‘qnorm’
plot.normal: no visible global function definition for ‘dnorm’
plot.normal: no visible global function definition for ‘plot’
plot.normal: no visible global function definition for ‘abline’
plot.normalexpgamma: no visible global function definition for ‘par’
plot.normalexpgamma: no visible global function definition for ‘plot’
plot.normalgamma: no visible global function definition for ‘qt’
plot.normalgamma: no visible global function definition for ‘qgamma’
plot.normalgamma: no visible global function definition for ‘par’
plot.normalgamma: no visible global function definition for ‘plot’
plot.poissondistribution: no visible global function definition for
‘plot’
plot.poissondistribution: no visible global function definition for
‘dpois’
plot.tdistribution: no visible global function definition for ‘qt’
plot.tdistribution: no visible global function definition for ‘plot’
plot.tdistribution: no visible global function definition for ‘dt’
plot.uniformdistribution: no visible global function definition for
‘plot’
plot.wishart: no visible global function definition for ‘par’
plot.wishart: no visible global function definition for ‘plot’
probability.binomialdistribution: no visible global function definition
for ‘dbinom’
probability.multinomialdistribution: no visible global function
definition for ‘dmultinom’
probability.poissondistribution: no visible global function definition
for ‘dpois’
probabilitydensity.betadistribution: no visible global function
definition for ‘dbeta’
probabilitydensity.expgamma: no visible global function definition for
‘dgamma’
probabilitydensity.fdistribution: no visible global function definition
for ‘df’
probabilitydensity.gammadistribution: no visible global function
definition for ‘dgamma’
probabilitydensity.mnormalexpgamma: no visible global function
definition for ‘dgamma’
probabilitydensity.mnormalgamma: no visible global function definition
for ‘dgamma’
probabilitydensity.normal: no visible global function definition for
‘dnorm’
probabilitydensity.normalexpgamma: no visible global function
definition for ‘dgamma’
probabilitydensity.normalexpgamma: no visible global function
definition for ‘dnorm’
probabilitydensity.normalgamma: no visible global function definition
for ‘dgamma’
probabilitydensity.normalgamma: no visible global function definition
for ‘dnorm’
probabilitydensity.tdistribution: no visible global function definition
for ‘dt’
probabilitydensity.wishart: no visible binding for global variable ‘df’
simulate.betadistribution: no visible global function definition for
‘rbeta’
simulate.binomialbeta: no visible global function definition for
‘rbeta’
simulate.binomialbeta: no visible global function definition for
‘rbinom’
simulate.binomialdistribution: no visible global function definition
for ‘rbinom’
simulate.expgamma: no visible global function definition for ‘rgamma’
simulate.fdistribution: no visible global function definition for ‘rf’
simulate.gammadistribution: no visible global function definition for
‘rgamma’
simulate.mnormal: no visible global function definition for ‘rnorm’
simulate.mnormalexpgamma: no visible global function definition for
‘rgamma’
simulate.mnormalexpgamma: no visible global function definition for
‘rnorm’
simulate.mnormalgamma: no visible global function definition for
‘rgamma’
simulate.mnormalgamma: no visible global function definition for
‘rnorm’
simulate.mtdistribution: no visible global function definition for
‘rgamma’
simulate.multinomialdistribution: no visible global function definition
for ‘rmultinom’
simulate.muniformdistribution: no visible global function definition
for ‘runif’
simulate.normal: no visible global function definition for ‘rnorm’
simulate.normalexpgamma: no visible global function definition for
‘rgamma’
simulate.normalexpgamma: no visible global function definition for
‘rnorm’
simulate.normalgamma: no visible global function definition for
‘rgamma’
simulate.normalgamma: no visible global function definition for ‘rnorm’
simulate.poissondistribution: no visible global function definition for
‘rpois’
simulate.tdistribution: no visible global function definition for ‘rt’
simulate.uniformdistribution: no visible global function definition for
‘runif’
simulate.wishart: no visible global function definition for ‘rnorm’
Undefined global functions or variables:
abline contour dbeta dbinom df dgamma dmultinom dnorm dpois dt image
lines par pbeta pbinom pchisq pf pgamma plot pnorm ppois pt qbeta
qbinom qf qgamma qnorm qpois qt rbeta rbinom rf rgamma rmultinom
rnorm rpois rt runif text
Consider adding
importFrom("graphics", "abline", "contour", "image", "lines", "par",
"plot", "text")
importFrom("stats", "dbeta", "dbinom", "df", "dgamma", "dmultinom",
"dnorm", "dpois", "dt", "pbeta", "pbinom", "pchisq", "pf",
"pgamma", "pnorm", "ppois", "pt", "qbeta", "qbinom", "qf",
"qgamma", "qnorm", "qpois", "qt", "rbeta", "rbinom", "rf",
"rgamma", "rmultinom", "rnorm", "rpois", "rt", "runif")
to your NAMESPACE file.
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... ERROR
Running examples in ‘lestat-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: betabinomial
> ### Title: Create an Object Representing a Beta-Binomial Distribution
> ### Aliases: betabinomial
> ### Keywords: distribution probabilitydistribution
>
> ### ** Examples
>
> dist <- betabinomial(10, 5.5, 3.3)
> cdf(dist, 3)
Error in UseMethod("cdf") :
no applicable method for 'cdf' applied to an object of class "c('betabinomial', 'probabilitydistribution')"
Calls: cdf
Execution halted
- checking PDF version of manual ... OK
- DONE
Status: 1 ERROR, 2 NOTEs