• using R version 3.5.0 RC (2018-04-16 r74618)
• using platform: x86_64-pc-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘glmmBUGS/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘glmmBUGS’ version ‘2.4.0’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘glmmBUGS’ can be installed ... OK
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [8s/12s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in Makefiles ... OK
• checking for GNU extensions in Makefiles ... OK
• checking include directives in Makefiles ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [3s/4s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [4s/5s] OK
    Running ‘bym.R’ [2s/3s]
    Running ‘openbugs.R’ [1s/1s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking re-building of vignette outputs ... [2s/2s] WARNING
  Error in re-building vignettes:
    ...
  Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
    there is no package called ‘R2jags’
  make[1]: Entering directory '/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/glmmBUGS.Rcheck/vign_test/glmmBUGS/vignettes'
  xelatex -interaction=nonstopmode jags.tex;
  This is XeTeX, Version 3.14159265-2.6-0.99998 (TeX Live 2017/Debian) (preloaded format=xelatex)
   restricted \write18 enabled.
  entering extended mode
  (./jags.tex
  LaTeX2e <2017-04-15>
  Babel <3.18> and hyphenation patterns for 84 language(s) loaded.
  (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls
  Document Class: article 2014/09/29 v1.4h Standard LaTeX document class
  (/usr/share/texlive/texmf-dist/tex/latex/base/size12.clo))
  (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
  (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
  (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifpdf.sty)
  (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifvtex.sty)
  (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty))
  (/home/hornik/tmp/R.check/r-patched-gcc/Work/build/share/texmf/tex/latex/Sweave
  .sty (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty)
  (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
  (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
  (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
  (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
  (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/xetex.def)))
  (/usr/share/texlive/texmf-dist/tex/latex/fancyvrb/fancyvrb.sty
  Style option: `fancyvrb' v2.7a, with DG/SPQR fixes, and firstline=lastline fix
  <2008/02/07> (tvz)) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty
  (/usr/share/texlive/texmf-dist/tex/latex/base/ts1enc.def))
  (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty
  (/usr/share/texlive/texmf-dist/tex/latex/base/t1enc.def)
  (/usr/share/texmf/tex/latex/lm/t1lmr.fd))
  (/usr/share/texlive/texmf-dist/tex/latex/ae/ae.sty
  (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty
  (/usr/share/texlive/texmf-dist/tex/latex/base/t1enc.def)
  (/usr/share/texlive/texmf-dist/tex/latex/ae/t1aer.fd))))
  No file jags.aux.
  (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmr.fd)
  *geometry* driver: auto-detecting
  *geometry* detected driver: xetex
  (/usr/share/texlive/texmf-dist/tex/latex/ae/t1aett.fd)
  (/home/hornik/tmp/R.check/r-patched-gcc/Work/build/share/texmf/tex/latex/ts1aet
  t.fd) (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd) [1]Syntax Error: Invalid page count 0
  Syntax Error: Cannot allocate page cache
  Segmentation fault
  Makefile:10: recipe for target 'jags.pdf' failed
  make[1]: *** [jags.pdf] Error 139
  make[1]: Leaving directory '/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/glmmBUGS.Rcheck/vign_test/glmmBUGS/vignettes'
  Error in buildVignettes(dir = "/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/glmmBUGS.Rcheck/vign_test/glmmBUGS") :
    running ‘make’ failed
  Execution halted
  
• checking PDF version of manual ... OK
• DONE

Status: 1 WARNING