* installing to library ‘/home/hornik/tmp/R.check/r-patched/Work/build/Packages’
* installing *source* package ‘farmR’ ...
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking for g++... g++
checking for C++ compiler default output file name... a.out
checking whether the C++ compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking for gcc... gcc -std=gnu99
checking whether we are using the GNU C compiler... yes
checking whether gcc -std=gnu99 accepts -g... yes
checking for gcc -std=gnu99 option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -std=gnu99 -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for stdlib.h... (cached) yes
checking for an ANSI C-conforming const... yes
checking for stdbool.h that conforms to C99... yes
checking for _Bool... yes
checking Java support in R... present:
interpreter : '/usr/bin/java'
archiver    : '/usr/bin/jar'
compiler    : '/usr/bin/javac'
header prep.: '/usr/bin/javah'
cpp flags   : '-I/usr/lib/jvm/java-6-openjdk-amd64/jre/../include'
java libs   : '-L/usr/lib/jvm/java-6-openjdk-amd64/jre/lib/amd64/server -L/usr/lib/jvm/java-6-openjdk-amd64/jre/lib/amd64 -L/usr/lib/jvm/java-6-openjdk-amd64/jre/../lib/amd64 -L/usr/local/lib64 -L/usr/java/packages/lib/amd64 -L/usr/lib/x86_64-linux-gnu/jni -L/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib/jni -L/lib -L/usr/lib -ljvm'
checking whether JNI programs can be compiled... yes
linux-gnu
Configuring 
configure: creating ./config.status
config.status: creating src/Makevars
** libs
javah -jni -classpath ../inst//java/javawfm.jar jfm.lp.GLPKPeer
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi01.c -o glpapi01.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi02.c -o glpapi02.o
glpapi02.c: In function ‘glp_get_row_lb’:
glpapi02.c:234:7: warning: ‘lb’ may be used uninitialized in this function [-Wuninitialized]
glpapi02.c: In function ‘glp_get_row_ub’:
glpapi02.c:267:7: warning: ‘ub’ may be used uninitialized in this function [-Wuninitialized]
glpapi02.c: In function ‘glp_get_col_lb’:
glpapi02.c:328:7: warning: ‘lb’ may be used uninitialized in this function [-Wuninitialized]
glpapi02.c: In function ‘glp_get_col_ub’:
glpapi02.c:362:7: warning: ‘ub’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi03.c -o glpapi03.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi04.c -o glpapi04.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi05.c -o glpapi05.o
glpapi05.c: In function ‘glp_set_row_stat’:
glpapi05.c:73:11: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpapi05.c: In function ‘glp_set_col_stat’:
glpapi05.c:127:11: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi06.c -o glpapi06.o
glpapi06.c: In function ‘simplex1’:
glpapi06.c:270:7: warning: ‘ret’ may be used uninitialized in this function [-Wuninitialized]
glpapi06.c: In function ‘glp_simplex’:
glpapi06.c:144:24: warning: ‘dir’ may be used uninitialized in this function [-Wuninitialized]
glpapi06.c:109:14: note: ‘dir’ was declared here
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi07.c -o glpapi07.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi08.c -o glpapi08.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi09.c -o glpapi09.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi10.c -o glpapi10.o
glpapi10.c: In function ‘_glp_check_kkt’:
glpapi10.c:251:18: warning: ‘t’ may be used uninitialized in this function [-Wuninitialized]
glpapi10.c:274:37: warning: ‘ae_max’ may be used uninitialized in this function [-Wuninitialized]
glpapi10.c:276:37: warning: ‘re_max’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi11.c -o glpapi11.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi12.c -o glpapi12.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi13.c -o glpapi13.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi14.c -o glpapi14.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi15.c -o glpapi15.o
glpapi15.c: In function ‘glp_read_mps’:
glpapi15.c:79:7: warning: ‘ret’ may be used uninitialized in this function [-Wuninitialized]
glpapi15.c: In function ‘glp_write_mps’:
glpapi15.c:131:7: warning: ‘ret’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi16.c -o glpapi16.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi17.c -o glpapi17.o
glpapi17.c: In function ‘glp_mpl_postsolve’:
glpapi17.c:215:18: warning: ‘x’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi18.c -o glpapi18.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi19.c -o glpapi19.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi20.c -o glpapi20.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpapi21.c -o glpapi21.o
glpapi21.c: In function ‘glp_main’:
glpapi21.c:870:14: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpapi21.c:871:14: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpapi21.c:876:11: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpavl.c -o glpavl.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpbfd.c -o glpbfd.o
glpbfd.c: In function ‘_glp_bfd_factorize’:
glpbfd.c:161:20: warning: ‘luf’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpbfx.c -o glpbfx.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpcpx.c -o glpcpx.o
glpcpx.c: In function ‘scan_token’:
glpcpx.c:187:7: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpcpx.c: In function ‘_glp_write_cpxlp’:
glpcpx.c:1074:13: warning: field width specifier ‘*’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ [-Wformat]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpdmp.c -o glpdmp.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpdmx.c -o glpdmx.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpfhv.c -o glpfhv.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpgmp.c -o glpgmp.o
glpgmp.c: In function ‘_glp_mpz_add’:
glpgmp.c:274:16: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpgmp.c:326:7: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpgmp.c: In function ‘_glp_mpz_cmp’:
glpgmp.c:758:7: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpgmp.c:762:7: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpgmp.c:811:7: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glphbm.c -o glphbm.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpini01.c -o glpini01.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpini02.c -o glpini02.o
glpini02.c: In function ‘_glp_cpx_basis’:
glpini02.c:148:26: warning: ‘temp’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpios01.c -o glpios01.o
glpios01.c: In function ‘_glp_ios_eval_degrad’:
glpios01.c:940:17: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpios01.c:945:17: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpios02.c -o glpios02.o
glpios02.c: In function ‘_glp_ios_preprocess_node’:
glpios02.c:354:44: warning: ‘iub’ may be used uninitialized in this function [-Wuninitialized]
glpios02.c:299:19: note: ‘iub’ was declared here
glpios02.c:355:44: warning: ‘ilb’ may be used uninitialized in this function [-Wuninitialized]
glpios02.c:299:14: note: ‘ilb’ was declared here
glpios02.c:468:51: warning: ‘uu’ may be used uninitialized in this function [-Wuninitialized]
glpios02.c:457:26: note: ‘uu’ was declared here
glpios02.c:466:53: warning: ‘ll’ may be used uninitialized in this function [-Wuninitialized]
glpios02.c:457:22: note: ‘ll’ was declared here
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpios03.c -o glpios03.o
glpios03.c: In function ‘branch_drtom’:
glpios03.c:577:23: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpios03.c:582:23: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpios03.c: In function ‘_glp_ios_driver’:
glpios03.c:1242:13: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpios03.c: In function ‘generate_cuts’:
glpios03.c:1763:17: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpios03.c: In function ‘show_progress’:
glpios03.c:92:14: warning: ‘rho’ may be used uninitialized in this function [-Wuninitialized]
glpios03.c: In function ‘_glp_ios_driver’:
glpios03.c:804:26: warning: ‘up_type’ may be used uninitialized in this function [-Wuninitialized]
glpios03.c:731:26: note: ‘up_type’ was declared here
glpios03.c:786:26: warning: ‘dn_type’ may be used uninitialized in this function [-Wuninitialized]
glpios03.c:731:17: note: ‘dn_type’ was declared here
glpios03.c:659:26: warning: ‘next’ may be used uninitialized in this function [-Wuninitialized]
glpios03.c:448:24: note: ‘next’ was declared here
glpios03.c:652:18: warning: ‘dd_up’ may be used uninitialized in this function [-Wuninitialized]
glpios03.c:450:17: note: ‘dd_up’ was declared here
glpios03.c:650:20: warning: ‘dd_dn’ may be used uninitialized in this function [-Wuninitialized]
glpios03.c:450:10: note: ‘dd_dn’ was declared here
glpios03.c:617:27: warning: ‘dz_dn’ may be used uninitialized in this function [-Wuninitialized]
glpios03.c:449:54: note: ‘dz_dn’ was declared here
glpios03.c:696:26: warning: ‘next’ may be used uninitialized in this function [-Wuninitialized]
glpios03.c:678:18: note: ‘next’ was declared here
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpios04.c -o glpios04.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpios05.c -o glpios05.o
glpios05.c: In function ‘_glp_ios_gmi_gen’:
glpios05.c:159:23: warning: ‘phi1’ may be used uninitialized in this function [-Wuninitialized]
glpios05.c:66:39: note: ‘phi1’ was declared here
glpios05.c:139:25: warning: ‘alfa’ may be used uninitialized in this function [-Wuninitialized]
glpios05.c:66:22: note: ‘alfa’ was declared here
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpios06.c -o glpios06.o
glpios06.c: In function ‘set_var_bounds’:
glpios06.c:197:16: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpios06.c: In function ‘mark_useless_rows’:
glpios06.c:273:17: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpios06.c: In function ‘_glp_ios_mir_gen’:
glpios06.c:968:16: warning: ‘x’ may be used uninitialized in this function [-Wuninitialized]
glpios06.c:944:17: note: ‘x’ was declared here
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpios07.c -o glpios07.o
glpios07.c: In function ‘_glp_ios_cov_gen’:
glpios07.c:416:26: warning: ‘beta’ may be used uninitialized in this function [-Wuninitialized]
glpios07.c:320:34: note: ‘beta’ was declared here
glpios07.c:439:22: warning: ‘alfa’ may be used uninitialized in this function [-Wuninitialized]
glpios07.c:320:28: note: ‘alfa’ was declared here
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpios08.c -o glpios08.o
glpios08.c: In function ‘eval_lf_max’:
glpios08.c:186:27: warning: ‘lb’ may be used uninitialized in this function [-Wuninitialized]
glpios08.c:178:27: warning: ‘ub’ may be used uninitialized in this function [-Wuninitialized]
glpios08.c: In function ‘eval_lf_min’:
glpios08.c:146:27: warning: ‘ub’ may be used uninitialized in this function [-Wuninitialized]
glpios08.c:138:27: warning: ‘lb’ may be used uninitialized in this function [-Wuninitialized]
glpios08.c: In function ‘_glp_ios_clq_init’:
glpios08.c:458:31: warning: ‘ub’ may be used uninitialized in this function [-Wuninitialized]
glpios08.c:49:14: note: ‘ub’ was declared here
glpios08.c:458:31: warning: ‘lb’ may be used uninitialized in this function [-Wuninitialized]
glpios08.c:29:14: note: ‘lb’ was declared here
glpios08.c:393:27: warning: ‘ub’ may be used uninitialized in this function [-Wuninitialized]
glpios08.c:49:14: note: ‘ub’ was declared here
glpios08.c:393:27: warning: ‘lb’ may be used uninitialized in this function [-Wuninitialized]
glpios08.c:29:14: note: ‘lb’ was declared here
glpios08.c: In function ‘_glp_ios_clq_gen’:
glpios08.c:683:14: warning: ‘p’ may be used uninitialized in this function [-Wuninitialized]
glpios08.c:648:17: note: ‘p’ was declared here
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpios09.c -o glpios09.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpios10.c -o glpios10.o
glpios10.c: In function ‘_glp_ios_feas_pump’:
glpios10.c:214:10: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpipm.c -o glpipm.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpipp01.c -o glpipp01.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpipp02.c -o glpipp02.o
glpipp02.c: In function ‘_glp_ipp_empty_col’:
glpipp02.c:201:11: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpipp02.c: In function ‘reduce_bounds’:
glpipp02.c:693:14: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpipp02.c:709:14: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpipp02.c: In function ‘reduce_coef’:
glpipp02.c:1106:14: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
g++ -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include   -Iinclude -I/usr/lib/jvm/java-6-openjdk-amd64/jre/../include -I -I. -fpic  -g -O2 -Wall -Wno-unused -pedantic -c glpkjni.cpp -o glpkjni.o
glpkjni.cpp: In member function ‘void GLPK::initConstraints()’:
glpkjni.cpp:101:21: warning: ISO C++ forbids variable length array ‘ia’ [-Wvla]
glpkjni.cpp:101:38: warning: ISO C++ forbids variable length array ‘ja’ [-Wvla]
glpkjni.cpp:102:24: warning: ISO C++ forbids variable length array ‘ar’ [-Wvla]
g++ -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include   -Iinclude -I/usr/lib/jvm/java-6-openjdk-amd64/jre/../include -I -I. -fpic  -g -O2 -Wall -Wno-unused -pedantic -c glpkpeer.cpp -o glpkpeer.o
glpkpeer.cpp: In function ‘jint Java_jfm_lp_GLPKPeer_solveWithNewProblem(JNIEnv*, jobject, jdoubleArray, jdoubleArray, jdoubleArray, jintArray, jdoubleArray, jintArray, jintArray, jdoubleArray, jintArray, jintArray, jobjectArray, jobjectArray, jlong)’:
glpkpeer.cpp:28:1: warning: no return statement in function returning non-void [-Wreturn-type]
glpkpeer.cpp: In function ‘jint Java_jfm_lp_GLPKPeer_solveWithNewCoefficients(JNIEnv*, jobject, jdoubleArray, jdoubleArray, jdoubleArray, jintArray, jintArray, jlong)’:
glpkpeer.cpp:36:1: warning: no return statement in function returning non-void [-Wreturn-type]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplib01.c -o glplib01.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplib02.c -o glplib02.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplib03.c -o glplib03.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplib04.c -o glplib04.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplib05.c -o glplib05.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplib06.c -o glplib06.o
glplib06.c: In function ‘_glp_lib_xldiv’:
glplib06.c:210:13: warning: ‘m’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplib07.c -o glplib07.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplib08.c -o glplib08.o
glplib08.c: In function ‘_glp_lib_xfgetc’:
glplib08.c:136:7: warning: ‘c’ may be used uninitialized in this function [-Wuninitialized]
glplib08.c: In function ‘_glp_lib_xferror’:
glplib08.c:214:7: warning: ‘ret’ may be used uninitialized in this function [-Wuninitialized]
glplib08.c: In function ‘_glp_lib_xfeof’:
glplib08.c:252:7: warning: ‘ret’ may be used uninitialized in this function [-Wuninitialized]
glplib08.c: In function ‘_glp_lib_xfflush’:
glplib08.c:291:7: warning: ‘ret’ may be used uninitialized in this function [-Wuninitialized]
glplib08.c: In function ‘_glp_lib_xfclose’:
glplib08.c:341:7: warning: ‘ret’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplib09.c -o glplib09.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplib10.c -o glplib10.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplib11.c -o glplib11.o
glplib11.c: In function ‘_glp_lib_gcdn’:
glplib11.c:327:7: warning: ‘d’ may be used uninitialized in this function [-Wuninitialized]
glplib11.c: In function ‘_glp_lib_fp2rat’:
glplib11.c:488:23: warning: ‘Bk’ may be used uninitialized in this function [-Wuninitialized]
glplib11.c:488:18: warning: ‘Bkm1’ may be used uninitialized in this function [-Wuninitialized]
glplib11.c:485:23: warning: ‘Ak’ may be used uninitialized in this function [-Wuninitialized]
glplib11.c:485:18: warning: ‘Akm1’ may be used uninitialized in this function [-Wuninitialized]
glplib11.c:477:18: warning: ‘xk’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplib12.c -o glplib12.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplpf.c -o glplpf.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplpp01.c -o glplpp01.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplpp02.c -o glplpp02.o
glplpp02.c: In function ‘process_empty_col’:
glplpp02.c:132:11: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glplpp02.c: In function ‘process_forcing_row’:
glplpp02.c:1314:10: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplpx01.c -o glplpx01.o
glplpx01.c: In function ‘_glp_lpx_get_status’:
glplpx01.c:431:7: warning: ‘status’ may be used uninitialized in this function [-Wuninitialized]
glplpx01.c: In function ‘_glp_lpx_ipt_status’:
glplpx01.c:609:7: warning: ‘status’ may be used uninitialized in this function [-Wuninitialized]
glplpx01.c: In function ‘_glp_lpx_mip_status’:
glplpx01.c:759:7: warning: ‘status’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplpx02.c -o glplpx02.o
glplpx02.c: In function ‘_glp_1px_put_solution’:
glplpx02.c:201:19: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glplpx02.c:202:19: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glplpx02.c:203:19: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glplpx02.c:204:19: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glplpx02.c:205:19: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glplpx02.c:206:19: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glplpx02.c:219:19: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glplpx02.c:220:19: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glplpx02.c:221:19: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glplpx02.c:222:19: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glplpx02.c:223:19: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glplpx02.c:224:19: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplpx03.c -o glplpx03.o
glplpx03.c: In function ‘_glp_lpx_prim_ratio_test’:
glplpx03.c:837:10: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glplpx03.c: In function ‘_glp_lpx_dual_ratio_test’:
glplpx03.c:989:10: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glplpx03.c: In function ‘_glp_1px_eval_b_prim’:
glplpx03.c:116:62: warning: ‘xN’ may be used uninitialized in this function [-Wuninitialized]
glplpx03.c: In function ‘_glp_lpx_prim_ratio_test’:
glplpx03.c:835:19: warning: ‘temp’ may be used uninitialized in this function [-Wuninitialized]
glplpx03.c: In function ‘_glp_lpx_dual_ratio_test’:
glplpx03.c:987:19: warning: ‘temp’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplpx04.c -o glplpx04.o
glplpx04.c: In function ‘_glp_lpx_print_sens_bnds’:
glplpx04.c:530:38: warning: ‘alpha’ may be used uninitialized in this function [-Wuninitialized]
glplpx04.c:498:38: warning: ‘alpha’ may be used uninitialized in this function [-Wuninitialized]
glplpx04.c:423:38: warning: ‘alpha’ may be used uninitialized in this function [-Wuninitialized]
glplpx04.c:391:38: warning: ‘alpha’ may be used uninitialized in this function [-Wuninitialized]
glplpx04.c:537:37: warning: ‘max_dec’ may be used uninitialized in this function [-Wuninitialized]
glplpx04.c:542:25: warning: ‘max_inc’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplpx05.c -o glplpx05.o
glplpx05.c: In function ‘_glp_lpx_write_pb’:
glplpx05.c:229:26: warning: ‘bound’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpluf.c -o glpluf.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glplux.c -o glplux.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpmat.c -o glpmat.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpmpl01.c -o glpmpl01.o
glpmpl01.c: In function ‘_glp_mpl_is_reserved’:
glpmpl01.c:472:10: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpmpl01.c:482:10: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpmpl01.c:483:10: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpmpl01.c: In function ‘_glp_mpl_iterated_expression’:
glpmpl01.c:1924:19: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpmpl01.c: In function ‘_glp_mpl_end_statement’:
glpmpl01.c:4529:12: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpmpl01.c: In function ‘_glp_mpl_iterated_expression’:
glpmpl01.c:1867:34: warning: ‘code’ may be used uninitialized in this function [-Wuninitialized]
glpmpl01.c:1881:13: note: ‘code’ was declared here
glpmpl01.c:1945:18: warning: ‘op’ may be used uninitialized in this function [-Wuninitialized]
glpmpl01.c: In function ‘_glp_mpl_primary_expression’:
glpmpl01.c:2197:7: warning: ‘code’ may be used uninitialized in this function [-Wuninitialized]
glpmpl01.c: In function ‘_glp_mpl_function_reference’:
glpmpl01.c:1180:23: warning: ‘op’ may be used uninitialized in this function [-Wuninitialized]
glpmpl01.c: In function ‘_glp_mpl_object_reference’:
glpmpl01.c:1026:7: warning: ‘code’ may be used uninitialized in this function [-Wuninitialized]
glpmpl01.c:974:18: warning: ‘dim’ may be used uninitialized in this function [-Wuninitialized]
glpmpl01.c:982:18: warning: ‘name’ may be used uninitialized in this function [-Wuninitialized]
glpmpl01.c:1008:25: warning: ‘var’ may be used uninitialized in this function [-Wuninitialized]
glpmpl01.c:1002:20: warning: ‘par’ may be used uninitialized in this function [-Wuninitialized]
glpmpl01.c:996:29: warning: ‘set’ may be used uninitialized in this function [-Wuninitialized]
glpmpl01.c:991:24: warning: ‘slot’ may be used uninitialized in this function [-Wuninitialized]
glpmpl01.c: In function ‘_glp_mpl_objective_statement’:
glpmpl01.c:3813:17: warning: ‘type’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpmpl02.c -o glpmpl02.o
glpmpl02.c: In function ‘_glp_mpl_read_slice’:
glpmpl02.c:270:10: warning: ‘close’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpmpl03.c -o glpmpl03.o
glpmpl03.c: In function ‘_glp_mpl_fp_add’:
glpmpl03.c:40:11: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpmpl03.c: In function ‘_glp_mpl_fp_sub’:
glpmpl03.c:53:11: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpmpl03.c: In function ‘_glp_mpl_fp_mod’:
glpmpl03.c:133:13: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpmpl03.c: In function ‘_glp_mpl_fp_power’:
glpmpl03.c:146:7: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpmpl03.c:153:13: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpmpl03.c:159:13: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpmpl03.c: In function ‘_glp_mpl_arelset_size’:
glpmpl03.c:1078:7: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpmpl03.c: In function ‘_glp_mpl_is_member’:
glpmpl03.c:4512:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpmpl03.c:4550:7: warning: ‘value’ may be used uninitialized in this function [-Wuninitialized]
glpmpl03.c: In function ‘_glp_mpl_eval_logical’:
glpmpl03.c:4191:23: warning: ‘value’ may be used uninitialized in this function [-Wuninitialized]
glpmpl03.c: In function ‘_glp_mpl_eval_symbolic’:
glpmpl03.c:3940:36: warning: ‘value’ may be used uninitialized in this function [-Wuninitialized]
glpmpl03.c: In function ‘_glp_mpl_eval_tuple’:
glpmpl03.c:4239:37: warning: ‘value’ may be used uninitialized in this function [-Wuninitialized]
glpmpl03.c: In function ‘_glp_mpl_eval_elemset’:
glpmpl03.c:4395:37: warning: ‘value’ may be used uninitialized in this function [-Wuninitialized]
glpmpl03.c: In function ‘_glp_mpl_take_member_set’:
glpmpl03.c:2387:7: warning: ‘refer’ may be used uninitialized in this function [-Wuninitialized]
glpmpl03.c: In function ‘printf_func’:
glpmpl03.c:5735:29: warning: ‘value’ may be used uninitialized in this function [-Wuninitialized]
glpmpl03.c: In function ‘_glp_mpl_take_member_sym’:
glpmpl03.c:2956:7: warning: ‘value’ may be used uninitialized in this function [-Wuninitialized]
glpmpl03.c: In function ‘_glp_mpl_take_member_num’:
glpmpl03.c:2721:7: warning: ‘value’ may be used uninitialized in this function [-Wuninitialized]
glpmpl03.c: In function ‘_glp_mpl_eval_formula’:
glpmpl03.c:4723:38: warning: ‘value’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpmpl04.c -o glpmpl04.o
glpmpl04.c: In function ‘_glp_mpl_get_row_kind’:
glpmpl04.c:943:7: warning: ‘kind’ may be used uninitialized in this function [-Wuninitialized]
glpmpl04.c: In function ‘_glp_mpl_get_col_kind’:
glpmpl04.c:1179:7: warning: ‘kind’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpmpl05.c -o glpmpl05.o
glpmpl05.c: In function ‘_glp_mpl_fn_str2time’:
glpmpl05.c:214:20: warning: ‘z’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpmpl06.c -o glpmpl06.o
glpmpl06.c: In function ‘dbf_write_record’:
glpmpl06.c:796:28: warning: ‘str’ may be used uninitialized in this function [-Wuninitialized]
glpmpl06.c: In function ‘_glp_mpl_tab_drv_read’:
glpmpl06.c:923:7: warning: ‘ret’ may be used uninitialized in this function [-Wuninitialized]
glpmpl06.c: In function ‘_glp_mpl_tab_drv_write’:
glpmpl06.c:945:10: warning: ‘ret’ may be used uninitialized in this function [-Wuninitialized]
glpmpl06.c: In function ‘_glp_mpl_tab_drv_close’:
glpmpl06.c:972:10: warning: ‘ret’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpmps01.c -o glpmps01.o
glpmps01.c: In function ‘_glp_write_mps’:
glpmps01.c:1130:21: warning: ‘rhs’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpmps02.c -o glpmps02.o
glpmps02.c: In function ‘_glp_write_freemps’:
glpmps02.c:1097:21: warning: ‘rhs’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpnet01.c -o glpnet01.o
glpnet01.c: In function ‘_glp_mc21a’:
glpnet01.c:154:23: warning: ‘in2’ may be used uninitialized in this function [-Wuninitialized]
glpnet01.c:154:23: warning: ‘ii’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpnet02.c -o glpnet02.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpnet03.c -o glpnet03.o
glpnet03.c: In function ‘glp_netgen’:
glpnet03.c:525:12: warning: ‘l’ may be used uninitialized in this function [-Wuninitialized]
glpnet03.c:517:20: note: ‘l’ was declared here
glpnet03.c:525:12: warning: ‘l’ may be used uninitialized in this function [-Wuninitialized]
glpnet03.c:517:20: note: ‘l’ was declared here
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpnet04.c -o glpnet04.o
glpnet04.c: In function ‘glp_gridgen’:
glpnet04.c:292:11: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpnet04.c:301:11: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpnet04.c:397:29: warning: ‘random’ may be used uninitialized in this function [-Wuninitialized]
glpnet04.c:375:13: note: ‘random’ was declared here
glpnet04.c:433:32: warning: ‘random’ may be used uninitialized in this function [-Wuninitialized]
glpnet04.c:404:13: note: ‘random’ was declared here
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpnet05.c -o glpnet05.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpnet06.c -o glpnet06.o
glpnet06.c: In function ‘_glp_okalg’:
glpnet06.c:155:10: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpnet06.c:161:10: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpnet06.c:202:17: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpnet06.c:347:34: warning: ‘temp’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpnet07.c -o glpnet07.o
glpnet07.c: In function ‘_glp_ffalg’:
glpnet07.c:192:34: warning: ‘temp’ may be used uninitialized in this function [-Wuninitialized]
glpnet07.c:78:24: warning: ‘j’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpqmd.c -o glpqmd.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glprgr.c -o glprgr.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glprng01.c -o glprng01.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glprng02.c -o glprng02.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpscf.c -o glpscf.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpscg.c -o glpscg.o
glpscg.c: In function ‘wclique’:
glpscg.c:317:14: warning: type defaults to ‘int’ in declaration of ‘wt’ [enabled by default]
glpscg.c: In function ‘_glp_scg_max_clique’:
glpscg.c:358:17: warning: ‘p’ may be used uninitialized in this function [-Wuninitialized]
glpscg.c:319:17: note: ‘p’ was declared here
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpscl.c -o glpscl.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpsds.c -o glpsds.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpspm.c -o glpspm.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpspx01.c -o glpspx01.o
glpspx01.c: In function ‘chuzr’:
glpspx01.c:1499:10: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpspx01.c: In function ‘_glp_spx_primal’:
glpspx01.c:2698:7: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpspx01.c:2727:7: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpspx01.c:2795:14: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpspx01.c:2881:14: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpspx01.c: In function ‘eval_obj’:
glpspx01.c:2327:29: warning: ‘xN’ may be used uninitialized in this function [-Wuninitialized]
glpspx01.c: In function ‘_glp_spx_primal’:
glpspx01.c:1752:35: warning: ‘xN’ may be used uninitialized in this function [-Wuninitialized]
glpspx01.c:831:14: note: ‘xN’ was declared here
glpspx01.c:2782:19: warning: ‘d_stat’ may be used uninitialized in this function [-Wuninitialized]
glpspx01.c:2782:19: warning: ‘p_stat’ may be used uninitialized in this function [-Wuninitialized]
glpspx01.c:901:36: warning: ‘xN’ may be used uninitialized in this function [-Wuninitialized]
glpspx01.c:831:14: note: ‘xN’ was declared here
glpspx01.c:2950:7: warning: ‘ret’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpspx02.c -o glpspx02.o
glpspx02.c: In function ‘chuzc’:
glpspx02.c:1535:10: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpspx02.c: In function ‘_glp_spx_dual’:
glpspx02.c:2710:7: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpspx02.c:2737:7: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpspx02.c:2867:14: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
glpspx02.c: In function ‘eval_obj’:
glpspx02.c:2284:29: warning: ‘xN’ may be used uninitialized in this function [-Wuninitialized]
glpspx02.c: In function ‘eval_beta’:
glpspx02.c:942:36: warning: ‘xN’ may be used uninitialized in this function [-Wuninitialized]
glpspx02.c: In function ‘display’:
glpspx02.c:2319:36: warning: ‘xN’ may be used uninitialized in this function [-Wuninitialized]
glpspx02.c: In function ‘_glp_spx_dual’:
glpspx02.c:1796:32: warning: ‘xN’ may be used uninitialized in this function [-Wuninitialized]
glpspx02.c:870:14: note: ‘xN’ was declared here
glpspx02.c:2788:19: warning: ‘d_stat’ may be used uninitialized in this function [-Wuninitialized]
glpspx02.c:2788:19: warning: ‘p_stat’ may be used uninitialized in this function [-Wuninitialized]
glpspx02.c:2924:7: warning: ‘ret’ may be used uninitialized in this function [-Wuninitialized]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpsql.c -o glpsql.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpssx01.c -o glpssx01.o
glpssx01.c: In function ‘_glp_ssx_chuzc’:
glpssx01.c:472:14: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glpssx02.c -o glpssx02.o
gcc -std=gnu99 -I/home/hornik/tmp/R.check/r-patched/Work/build/include  -I/usr/local/include    -fpic  -g -O6 -Wall -Wno-unused -pedantic -c glptsp.c -o glptsp.o
glptsp.c: In function ‘_glp_tsp_distance’:
glptsp.c:663:7: warning: ‘dij’ may be used uninitialized in this function [-Wuninitialized]
g++ -shared -L/usr/local/lib64 -o farmR.so glpapi01.o glpapi02.o glpapi03.o glpapi04.o glpapi05.o glpapi06.o glpapi07.o glpapi08.o glpapi09.o glpapi10.o glpapi11.o glpapi12.o glpapi13.o glpapi14.o glpapi15.o glpapi16.o glpapi17.o glpapi18.o glpapi19.o glpapi20.o glpapi21.o glpavl.o glpbfd.o glpbfx.o glpcpx.o glpdmp.o glpdmx.o glpfhv.o glpgmp.o glphbm.o glpini01.o glpini02.o glpios01.o glpios02.o glpios03.o glpios04.o glpios05.o glpios06.o glpios07.o glpios08.o glpios09.o glpios10.o glpipm.o glpipp01.o glpipp02.o glpkjni.o glpkpeer.o glplib01.o glplib02.o glplib03.o glplib04.o glplib05.o glplib06.o glplib07.o glplib08.o glplib09.o glplib10.o glplib11.o glplib12.o glplpf.o glplpp01.o glplpp02.o glplpx01.o glplpx02.o glplpx03.o glplpx04.o glplpx05.o glpluf.o glplux.o glpmat.o glpmpl01.o glpmpl02.o glpmpl03.o glpmpl04.o glpmpl05.o glpmpl06.o glpmps01.o glpmps02.o glpnet01.o glpnet02.o glpnet03.o glpnet04.o glpnet05.o glpnet06.o glpnet07.o glpqmd.o glprgr.o glprng01.o glprng02.o glpscf.o glpscg.o glpscl.o glpsds.o glpspm.o glpspx01.o glpspx02.o glpsql.o glpssx01.o glpssx02.o glptsp.o -L/home/hornik/tmp/R.check/r-patched/Work/build/lib -lR
installing to /home/hornik/tmp/R.check/r-patched/Work/build/Packages/farmR/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (farmR)