• using R version 2.14.1 Patched (2012-02-04 r58267)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘degreenet/DESCRIPTION’ ... OK
• this is package ‘degreenet’ version ‘1.1’
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... NOTE
  As from R 2.14.0 all packages need a namespace.
  One will be generated on installation, but it is better to handcraft a
  NAMESPACE file: R CMD build will produce a suitable starting point.
• checking for executable files ... OK
• checking whether package ‘degreenet’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  File ‘degreenet/R/zzz.R’:
  .First.lib calls:
  cat("\ndegreenet:", info[, "Title"], "\nVersion", info[, "Version"], "created on", info[, "Date"], "\n")
  cat(paste("copyright (c) 2003, Mark S. Handcock, University of California-Los Angeles\n", " David R. Hunter, Penn State University\n", " Carter T. Butts, University of California-Irvine\n", " Steven M. Goodreau, University of Washington\n", " Pavel N. Krivitsky, Carnegie Mellon University\n", " Martina Morris, University of Washington\n", sep = ""))
  cat("Type help(package=\"degreenet\") to get started.\n\n")
  cat("Based on \"statnet\" project software (http://statnet.org).\n", "For license and citation information see http://statnet.org/attribution\n", "or type citation(\"degreenet\").\n")
  
  Package startup functions should use ‘packageStartupMessage’ to
  generate messages.
  See section ‘Good practice’ in ?.onAttach.
  
  dpln.refined: warning in gauss.hermite(points, iter = 1000): partial
  argument match of 'iter' to 'iterlim'
  dpln1: warning in gauss.hermite(points, iter = 1000): partial argument
  match of 'iter' to 'iterlim'
  is.psd: warning in eigen(V, sym = TRUE, only.values = TRUE): partial
  argument match of 'sym' to 'symmetric'
  llggeo: warning in pgeom(q = 100 - cutoff, prob = 1/v[1], lower =
  TRUE): partial argument match of 'lower' to 'lower.tail'
  llggeo: warning in pgeom(q = 20 - cutoff, prob = 1/v[1], lower = TRUE):
  partial argument match of 'lower' to 'lower.tail'
  llggeo: warning in pgeom(q = 100 - cutoff, prob = 1/v[1], lower =
  FALSE, log.p = TRUE): partial argument match of 'lower' to
  'lower.tail'
  llggeo: warning in pgeom(q = 4 - cutoff, prob = 1/v[1], lower = TRUE):
  partial argument match of 'lower' to 'lower.tail'
  llgnb: warning in pnbinom(q = 100 - cutoff, size = v[1] * v[2], prob =
  v[2], lower = TRUE): partial argument match of 'lower' to
  'lower.tail'
  llgnb: warning in pnbinom(q = 20 - cutoff, size = v[1] * v[2], prob =
  v[2], lower = TRUE): partial argument match of 'lower' to
  'lower.tail'
  llgnb: warning in pnbinom(q = 100 - cutoff, size = v[1] * v[2], prob =
  v[2], lower = FALSE, log.p = TRUE): partial argument match of 'lower'
  to 'lower.tail'
  llgnb: warning in pnbinom(q = 4 - cutoff, size = v[1] * v[2], prob =
  v[2], lower = TRUE): partial argument match of 'lower' to
  'lower.tail'
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking compiled code ... OK
• checking examples ... OK
• checking PDF version of manual ... OK