• using R version 3.0.1 Patched (2013-05-16 r62757)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘bsml/DESCRIPTION’ ... OK
• this is package ‘bsml’ version ‘1.5-1’
• checking package namespace information ... OK
• checking package dependencies ... NOTE
  Package suggested but not available for checking: ‘assist’
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘bsml’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  has: no visible global function definition for ‘bdiag’
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking compiled code ... OK
• checking examples ... ERROR
  Running examples in ‘bsml-Ex.R’ failed
  The error most likely occurred in:
  
  > ### Name: bsml
  > ### Title: Basis Selection from Multiple Libraries Ver. 1.5-1
  > ### Aliases: bsml
  > ### Keywords: smooth
  >
  > ### ** Examples
  >
  > ##############################
  > # Heavisine Function Example #
  > ##############################
  > n=128
  > x=seq(0,1,length=n)
  > pt=(rep(1,n)%o%x)[,-c(n)]
  > f=2.2*(4*sin(4*pi*x)-sign(x-.3)-sign(.72-x))
  > set.seed(123)
  > sigma=3
  > y=f+sigma*rnorm(n)
  > lib1=stdz(cbind(rep(1,length=n)))
  > lib2=stdz(1*cbind((x-pt)>0))
  > baseslist=list(lib1,lib2)
  > has.obj=bsml(y,baseslist,method="has")
  At line 6302 of file bsml.f
  Fortran runtime error: Index '2' of dimension 1 of array 'dx' above upper bound of 1