* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘biomod2’ ...
** package ‘biomod2’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading


Checking Models arguments...
** help
*** installing help indices
  converting help for package ‘biomod2’
    finding HTML links ... done
    BIOMOD.ensemble.models.out              html  
    BIOMOD.formated.data.PA                 html  
    BIOMOD.formated.data                    html  
    BIOMOD.models.options                   html  
    BIOMOD.models.out                       html  
    BIOMOD.projection.out                   html  
    BIOMOD.stored.data                      html  
    BIOMOD_ConvertOldRun-deprecated         html  
    BIOMOD_CrossValidation-deprecated       html  
    BIOMOD_EnsembleForecasting              html  
    BIOMOD_EnsembleModeling                 html  
    BIOMOD_FormatingData                    html  
    BIOMOD_LoadModels                       html  
    BIOMOD_Modeling                         html  
    BIOMOD_ModelingOptions                  html  
    BIOMOD_PresenceOnly                     html  
    BIOMOD_Projection                       html  
    BIOMOD_RangeSize                        html  
    BIOMOD_Tuning                           html  
    BIOMOD_cv-deprecated                    html  
    BIOMOD_presenceonly-deprecated          html  
    BIOMOD_tuning-deprecated                html  
    BinaryTransformation-deprecated         html  
    CustomIndexMaker-deprecated             html  
    DataSpecies                             html  
    FilteringTransformation-deprecated      html  
    Find.Optim.Stat-deprecated              html  
    Print_Default_ModelingOptions-deprecated
                                            html  
    ProbDensFunc-deprecated                 html  
    bioclim_current                         html  
    bioclim_future                          html  
    biomod2-deprecated                      html  
    biomod2_ensemble_model                  html  
    biomod2_model                           html  
    bm_BinaryTransformation                 html  
    bm_CVnnet                               html  
    bm_CrossValidation                      html  
    bm_FindOptimStat                        html  
    bm_MakeFormula                          html  
    bm_PlotEvalBoxplot                      html  
    bm_PlotEvalMean                         html  
    bm_PlotRangeSize                        html  
    bm_PlotResponseCurves                   html  
    bm_PlotVarImpBoxplot                    html  
    bm_PseudoAbsences                       html  
    bm_RunModelsLoop                        html  
    bm_SRE                                  html  
    bm_SampleBinaryVector                   html  
    bm_SampleFactorLevels                   html  
    bm_VariablesImportance                  html  
    calculate.stat-deprecated               html  
    check_duplicated_cells                  html  
    dot-categorical2numeric                 html  
    dot-check_bytes_format                  html  
    dot-get_categorical_names               html  
    dot-get_env_class                       html  
    dot-load_gam_namespace                  html  
    dot-transform.outputs.array-deprecated
                                            html  
    dot-transform.outputs.list-deprecated   html  
    dot-transform_model.as.col              html  
    getStatOptimValue-deprecated            html  
    getters.bm                              html  
    getters.out                             html  
    load_stored_object                      html  
    makeFormula-deprecated                  html  
    models_scores_graph-deprecated          html  
    plot                                    html  
    predict.bm                              html  
    predict.em                              html  
    predict2.bm                             html  
    predict2.em                             html  
    rast.has.values                         html  
    response.plot-deprecated                html  
    response.plot2-deprecated               html  
    sample.factor.levels-deprecated         html  
    sre-deprecated                          html  
    summary                                 html  
    update_objects-deprecated               html  
    variables_importance-deprecated         html  
    zzz_bm                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (biomod2)