- using R version 2.15.0 Patched (2012-05-19 r59366)
- using platform: x86_64-unknown-linux-gnu (64-bit)
- using session charset: UTF-8
- checking for file ‘bcrm/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘bcrm’ version ‘0.3’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking whether package ‘bcrm’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
HTGamma: no visible binding for global variable ‘N1’
HTGamma: no visible global function definition for ‘pow’
HTGamma: no visible binding for global variable ‘d’
HTGamma: no visible binding for global variable ‘alpha’
HTLogNormal: no visible binding for global variable ‘N1’
HTLogNormal: no visible global function definition for ‘pow’
HTLogNormal: no visible binding for global variable ‘d’
HTLogNormal: no visible binding for global variable ‘alpha’
HTLogNormal: no visible binding for global variable ‘p2’
HTUnif: no visible binding for global variable ‘N1’
HTUnif: no visible global function definition for ‘pow’
HTUnif: no visible binding for global variable ‘d’
HTUnif: no visible binding for global variable ‘alpha’
LogisticGamma: no visible binding for global variable ‘N1’
LogisticGamma: no visible binding for global variable ‘alpha’
LogisticGamma: no visible binding for global variable ‘d’
LogisticLogNormal: no visible binding for global variable ‘N1’
LogisticLogNormal: no visible binding for global variable ‘alpha’
LogisticLogNormal: no visible binding for global variable ‘d’
LogisticLogNormal: no visible binding for global variable ‘p2’
LogisticUnif: no visible binding for global variable ‘N1’
LogisticUnif: no visible binding for global variable ‘alpha’
LogisticUnif: no visible binding for global variable ‘d’
Posterior.exact: multiple local function definitions for
‘int.dose.mean’ with different formal arguments
Posterior.exact: multiple local function definitions for ‘int.dose.sd’
with different formal arguments
Posterior.exact: multiple local function definitions for ‘lik’ with
different formal arguments
Posterior.exact.sim: multiple local function definitions for
‘int.dose.mean’ with different formal arguments
Posterior.exact.sim: multiple local function definitions for ‘lik’ with
different formal arguments
PowerGamma: no visible binding for global variable ‘N1’
PowerGamma: no visible global function definition for ‘pow’
PowerGamma: no visible binding for global variable ‘d’
PowerGamma: no visible binding for global variable ‘alpha’
PowerLogNormal: no visible binding for global variable ‘N1’
PowerLogNormal: no visible global function definition for ‘pow’
PowerLogNormal: no visible binding for global variable ‘d’
PowerLogNormal: no visible binding for global variable ‘alpha’
PowerLogNormal: no visible binding for global variable ‘p2’
PowerUnif: no visible binding for global variable ‘N1’
PowerUnif: no visible global function definition for ‘pow’
PowerUnif: no visible binding for global variable ‘d’
PowerUnif: no visible binding for global variable ‘alpha’
TwoPLogisticLogNormal: no visible binding for global variable ‘N1’
TwoPLogisticLogNormal: no visible global function definition for
‘logit<-’
TwoPLogisticLogNormal: no visible binding for global variable
‘log.alpha’
TwoPLogisticLogNormal: no visible binding for global variable ‘d’
TwoPLogisticLogNormal: no visible global function definition for
‘inverse’
TwoPLogisticLogNormal: no visible binding for global variable ‘p2’
plot.bcrm: no visible binding for global variable ‘est’
plot.bcrm: no visible binding for global variable ‘target.tox’
plot.bcrm: no visible binding for global variable ‘q2.5’
plot.bcrm: no visible binding for global variable ‘q97.5’
plot.bcrm: no visible binding for global variable ‘q50’
plot.bcrm: no visible binding for global variable ‘q25’
plot.bcrm: no visible binding for global variable ‘q75’
plot.bcrm: no visible binding for global variable ‘ndose’
plot.bcrm: no visible binding for global variable ‘tox.cutpoints’
plot.bcrm: no visible binding for global variable ‘xmin’
plot.bcrm: no visible binding for global variable ‘ymin’
plot.bcrm: no visible binding for global variable ‘xmax’
plot.bcrm: no visible binding for global variable ‘ymax’
plot.bcrm: no visible binding for global variable ‘Loss’
plot.bcrm: no visible binding for global variable ‘Outcome’
plot.bcrm.sim: no visible binding for global variable ‘patient’
plot.bcrm.sim: no visible binding for global variable ‘traj’
plot.bcrm.sim: no visible binding for global variable ‘Statistic’
plot.bcrm.sim: no visible binding for global variable ‘..density..’
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking examples ... [15s/15s] OK
- checking PDF version of manual ... OK
NOTE: There was 1 note.
See
‘/home/hornik/tmp/R.check/r-patched/Work/PKGS/bcrm.Rcheck/00check.log’
for details.