• using R version 2.15.0 Patched (2012-05-19 r59366)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘SRPM/DESCRIPTION’ ... OK
• this is package ‘SRPM’ version ‘0.1-6’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking whether package ‘SRPM’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  File ‘SRPM/R/zzz.R’:
  .onLoad calls:
  require(pkg, quietly = TRUE, character.only = TRUE)
  
  Package startup functions should not change the search path.
  See section ‘Good practice’ in ?.onAttach.
  
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... NOTE
  The following files are already in R: ‘jss.bst’
  Please remove them from your package.
  The following files should probably not be installed:
  ‘SRPM.tex’
  
  Consider the use of a .Rinstignore file: see ‘Writing R Extensions’,
  or move the vignette sources from ‘inst/doc’ to ‘vignettes’.
• checking examples ... [1s/1s] OK
• checking for unstated dependencies in tests ... OK
• checking tests ... [1s/1s] OK
  Running ‘reg-tests.R’ [1s/1s]
  Comparing ‘reg-tests.Rout’ to ‘reg-tests.Rout.save’ ...9c9
  < [1] "/home/hornik/tmp/R.check/r-patched/Work/build/Packages/SRPM/SRP-ex/srp_simple"
  ---
  > [1] "/Users/rdpeng/projects/R-packages/SRPM.Rcheck/SRPM/SRP-ex/srp_simple"
  24c24
  < .. .. ..@ dir : chr "/home/hornik/tmp/R.check/r-patched/Work/build/Packages/SRPM/SRP-ex/srp_simple/cacheDB/FitLinearModel"
  ---
  > .. .. ..@ dir : chr "/Users/rdpeng/projects/R-packages/SRPM.Rcheck/SRPM/SRP-ex/srp_simple/cacheDB/FitLinearModel"
  40,41c40,55
  < ERROR: unable to run code chunk 3
  < there is no package called 'xtable'
  ---
  > % latex table generated in R 2.12.0 by xtable 1.5-6 package
  > % Mon Apr 12 11:22:33 2010
  > \begin{table}[ht]
  > \begin{center}
  > \begin{tabular}{rrrrr}
  > \hline
  > & Estimate & Std. Error & t value & Pr($>$$|$t$|$) \\
  > \hline
  > (Intercept) & -64.3421 & 23.0547 & -2.79 & 0.0062 \\
  > Temp & 1.6521 & 0.2535 & 6.52 & 0.0000 \\
  > Wind & -3.3336 & 0.6544 & -5.09 & 0.0000 \\
  > Solar.R & 0.0598 & 0.0232 & 2.58 & 0.0112 \\
  > \hline
  > \end{tabular}
  > \end{center}
  > \end{table}
  48,49c62,77
  < ERROR: unable to run code chunk 3
  < there is no package called 'xtable'
  ---
  > % latex table generated in R 2.12.0 by xtable 1.5-6 package
  > % Mon Apr 12 11:22:33 2010
  > \begin{table}[ht]
  > \begin{center}
  > \begin{tabular}{rrrrr}
  > \hline
  > & Estimate & Std. Error & t value & Pr($>$$|$t$|$) \\
  > \hline
  > (Intercept) & -64.3421 & 23.0547 & -2.79 & 0.0062 \\
  > Temp & 1.6521 & 0.2535 & 6.52 & 0.0000 \\
  > Wind & -3.3336 & 0.6544 & -5.09 & 0.0000 \\
  > Solar.R & 0.0598 & 0.0232 & 2.58 & 0.0112 \\
  > \hline
  > \end{tabular}
  > \end{center}
  > \end{table}
  87,88c115,130
  < ERROR: unable to run code chunk 3
  < there is no package called 'xtable'
  ---
  > % latex table generated in R 2.12.0 by xtable 1.5-6 package
  > % Mon Apr 12 11:22:33 2010
  > \begin{table}[ht]
  > \begin{center}
  > \begin{tabular}{rrrrr}
  > \hline
  > & Estimate & Std. Error & t value & Pr($>$$|$t$|$) \\
  > \hline
  > (Intercept) & -64.3421 & 23.0547 & -2.79 & 0.0062 \\
  > Temp & 1.6521 & 0.2535 & 6.52 & 0.0000 \\
  > Wind & -3.3336 & 0.6544 & -5.09 & 0.0000 \\
  > Solar.R & 0.0598 & 0.0232 & 2.58 & 0.0112 \\
  > \hline
  > \end{tabular}
  > \end{center}
  > \end{table}
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... [1s/1s] OK
• checking re-building of vignette PDFs ... [2s/3s] OK
• checking PDF version of manual ... OK
  NOTE: There were 2 notes.
  See
  ‘/home/hornik/tmp/R.check/r-patched/Work/PKGS/SRPM.Rcheck/00check.log’
  for details.