• using R version 2.14.1 Patched (2012-02-07 r58290)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘R2HTML/DESCRIPTION’ ... OK
• this is package ‘R2HTML’ version ‘2.2’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking whether package ‘R2HTML’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  HTML.Arima: warning in deparse(x$call, width = 75): partial argument
  match of 'width' to 'width.cutoff'
  HTML.StructTS: warning in deparse(x$call, width = 75): partial argument
  match of 'width' to 'width.cutoff'
  HTML.arima0: warning in deparse(x$call, width = 75): partial argument
  match of 'width' to 'width.cutoff'
  HTML.coefmat: warning in round(xm[, tst.ind], dig = dig.tst): partial
  argument match of 'dig' to 'digits'
  HTML.coefmat: warning in zapsmall(xm[, zap.ind], dig = digits): partial
  argument match of 'dig' to 'digits'
  HTML.ecdf : numform: warning in formatC(x, dig = digits): partial
  argument match of 'dig' to 'digits'
  HTML.ecdf: warning in eval(expression(x), env = environment(x)):
  partial argument match of 'env' to 'envir'
  HTML.ftable: warning in matrix("", nr = length(xcv), nc = length(xrv)):
  partial argument match of 'nr' to 'nrow'
  HTML.ftable: warning in matrix("", nr = length(xcv), nc = length(xrv)):
  partial argument match of 'nc' to 'ncol'
  HTML.stepfun : numform: warning in formatC(x, dig = digits): partial
  argument match of 'dig' to 'digits'
  HTML.stepfun: warning in eval(expression(x), env = env): partial
  argument match of 'env' to 'envir'
  HTML.stepfun: warning in eval(expression(c(yleft, y)), env = env):
  partial argument match of 'env' to 'envir'
  HTML.ts: warning in matrix(c(rep("", start.pad), format(x, ...),
  rep("", end.pad)), nc = fr.x, byrow = TRUE, dimnames = list(dn1,
  dn2)): partial argument match of 'nc' to 'ncol'
  HTMLInitFile: warning in assign(".HTML.file", file, env = .GlobalEnv):
  partial argument match of 'env' to 'envir'
  HTMLInitFile: warning in assign(".HTML.file", absfilemain, env =
  .GlobalEnv): partial argument match of 'env' to 'envir'
  HTMLStart : fix: warning in assign(".HTML.fix", TRUE, env =
  get("HTMLenv", envir = .GlobalEnv)): partial argument match of 'env'
  to 'envir'
  HTMLStart : fix: warning in assign(".HTML.fixed", subx, env =
  get("HTMLenv", envir = .GlobalEnv)): partial argument match of 'env'
  to 'envir'
  HTMLStart : fix: warning in assign(subx, x, env = .GlobalEnv): partial
  argument match of 'env' to 'envir'
  HTMLStart: warning in assign("fix", fix, env = .GlobalEnv): partial
  argument match of 'env' to 'envir'
  HTMLStart: warning in assign(".HTML.graph", FALSE, env = get("HTMLenv",
  envir = .GlobalEnv)): partial argument match of 'env' to 'envir'
  HTMLplot: warning in exists("X11", env = .GlobalEnv): partial argument
  match of 'env' to 'envir'
  HTMLplot: warning in assign(".HTML.graph", TRUE, env = get("HTMLenv",
  envir = .GlobalEnv)): partial argument match of 'env' to 'envir'
  RweaveHTMLRuncode: warning in png(file = paste(chunkprefix, "png", sep
  = "."), width = options$width, height = options$height, bg =
  options$bg, pointsize = options$pointsize): partial argument match of
  'file' to 'filename'
• checking Rd files ... NOTE
  prepare_Rd: HTML.Rd:178: Dropping empty section \references
  prepare_Rd: HTML.function.Rd:23: Dropping empty section \references
  prepare_Rd: HTML.title.Rd:22-23: Dropping empty section \details
  prepare_Rd: HTML.title.Rd:27: Dropping empty section \references
  prepare_Rd: HTML2clip.Rd:25: Dropping empty section \references
  prepare_Rd: HTMLCSS.Rd:23: Dropping empty section \note
  prepare_Rd: HTMLInitFile.Rd:30-31: Dropping empty section \details
  prepare_Rd: HTMLInitFile.Rd:36: Dropping empty section \references
  prepare_Rd: HTMLStart.Rd:46: Dropping empty section \references
  prepare_Rd: HTMLbr.Rd:30: Dropping empty section \references
  prepare_Rd: HTMLplot.Rd:37: Dropping empty section \references
  prepare_Rd: R2HTML-internal.Rd:26-28: Dropping empty section \examples
  prepare_Rd: RweaveHTML.Rd:18-19: Dropping empty section \details
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... NOTE
  S3 methods shown with full name in documentation object 'HTML.cormat':
  ‘HTML.cormat’
  
  S3 methods shown with full name in documentation object 'HTML.title':
  ‘HTML.title’
  
  The \usage entries for S3 methods should use the \method markup and not
  their full name.
  See the chapter ‘Writing R documentation files’ in the ‘Writing R
  Extensions’ manual.
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking examples ... OK
• checking PDF version of manual ... OK