• using R version 2.14.2 RC (2012-02-23 r58468)
  • using platform: i686-pc-linux-gnu (32-bit)
  • using session charset: UTF-8
  • checking for file ‘meta/DESCRIPTION’ ... OK
  • this is package ‘meta’ version ‘1.6-1’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking whether package ‘meta’ can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    File ‘meta/R/meta-internal.R’:
    .onLoad calls:
    cat("load meta: ", libname, "...\n")

    Package startup functions should use ‘packageStartupMessage’ to
    generate messages.
    See section ‘Good practice’ in ?.onAttach.

    metabias: warning in metabin(event.e, n.e, event.c, n.c, sm = x$sm,
    meth = "Inv", incr = x$incr, allincr = x$allincr, allstudies =
    x$allstudies, MH.exact = x$MH.exact, RR.cochrane = x$RR.cochrane):
    partial argument match of 'meth' to 'method'
    metacr: warning in metabin(x$event.e[sel], x$n.e[sel], x$event.c[sel],
    x$n.c[sel], sm = sm, meth = meth, studlab = x$studlab[sel],
    comb.fixed = comb.fixed, comb.random = comb.random, title = title,
    complab = complab, outclab = outclab, label.e = label.e, label.c =
    label.c, RR.cochrane = RR.cochrane): partial argument match of 'meth'
    to 'method'
    trimfill.default: warning in metabias(TE, seTE, meth = "linreg"):
    partial argument match of 'meth' to 'method'
    trimfill.meta: warning in metabias(TE, seTE, meth = "linreg"): partial
    argument match of 'meth' to 'method'
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... WARNING
    Files not of a type allowed in a ‘data’ directory:
    ‘FLEISS93.MTV’
    Please use e.g. ‘inst/extdata’ for non-R data files
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking line endings in Makefiles ... OK
  • checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
  • checking compiled code ... OK
  • checking examples ... OK
  • checking PDF version of manual ... OK
    WARNING: There was 1 warning, see
    ‘/home/hornik/tmp/R.check/r-patched/Work/PKGS/meta.Rcheck/00check.log’
    for details