• using R version 2.9.1 Patched (2009-07-01 r48886)
• using session charset: UTF-8
• checking for file 'ggm/DESCRIPTION' ... OK
• this is package 'ggm' version '1.0.2'
• checking package name space information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking whether package 'ggm' can be installed ... WARNING
  Found the following significant warnings:
  Warning: unmatched right brace in file 'checkIdent.Rd' on line 37
  Warning: unmatched right brace in file 'rsphere.Rd' on line 20
  Warning: unmatched right brace in file 'shipley.test.Rd' on line 18
  Warning: unmatched right brace in file 'triDec.Rd' on line 27
  See http://www.r-project.org/nosvn/R.check/r-patched-linux-ix86/ggm-00install.html for details.
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... NOTE
  Non-standard license specification:
  GPL version 2 or newer
  Standardizable: TRUE
  Standardized license specification:
  GPL (>= 2)
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the name space can be loaded with stated dependencies ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... OK
• checking Rd files against version 2 parser ... WARNING
  *** error on file ./man/checkIdent.Rd
  Error in parse_Rd("./man/checkIdent.Rd", encoding = "unknown") :
  ./man/checkIdent.Rd:37:1: unexpected '}'
  36: hidden variable. \emph{Biometrika}, 92(2), 337-350.}
  37: }
  ^
  
  *** error on file ./man/fitCovGraph.Rd
  Error : ./man/fitCovGraph.Rd:48: Unrecognized macro \S
  
  *** error on file ./man/rsphere.Rd
  Error in parse_Rd("./man/rsphere.Rd", encoding = "unknown") :
  ./man/rsphere.Rd:20:2: unexpected '}'
  19: \value{a matrix of \code{n} rows and \code{d} columns.
  20: }}
  ^
  
  *** error on file ./man/shipley.test.Rd
  Error in parse_Rd("./man/shipley.test.Rd", encoding = "unknown") :
  ./man/shipley.test.Rd:18:1: unexpected '}'
  17: }
  18: }
  ^
  
  *** error on file ./man/triDec.Rd
  Error in parse_Rd("./man/triDec.Rd", encoding = "unknown") :
  ./man/triDec.Rd:27:1: unexpected '}'
  26: The elements on the diagonal of \eqn{\Delta} are the partial variances.}
  27: }
  ^
  
  problems found in ‘checkIdent.Rd’, ‘fitCovGraph.Rd’, ‘rsphere.Rd’, ‘shipley.test.Rd’, ‘triDec.Rd’
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking data for non-ASCII characters ... OK
• checking examples ... OK
• checking PDF version of manual ... OK