• using R version 2.14.1 Patched (2012-02-05 r58287)
• using platform: i686-pc-linux-gnu (32-bit)
• using session charset: UTF-8
• checking for file ‘eigenmodel/DESCRIPTION’ ... OK
• this is package ‘eigenmodel’ version ‘1.0’
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... NOTE
  As from R 2.14.0 all packages need a namespace.
  One will be generated on installation, but it is better to handcraft a
  NAMESPACE file: R CMD build will produce a suitable starting point.
• checking for executable files ... OK
• checking whether package ‘eigenmodel’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... NOTE
  Non-standard license specification:
  GPL Version 2
  Standardizable: TRUE
  Standardized license specification:
  GPL-2
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  Y_impute: no visible binding for global variable ‘pp_zq’
  Y_impute: no visible binding for global variable ‘Ranks’
  Y_impute: no visible binding for global variable ‘Z’
  eigenmodel_setup: no visible binding for global variable ‘Y’
  rUL_fc: no visible binding for global variable ‘Z’
  rUL_fc: no visible binding for global variable ‘X’
  rUL_fc: no visible binding for global variable ‘b’
  rUL_fc: no visible binding for global variable ‘UL’
  rUL_fc: no visible binding for global variable ‘R’
  rUL_fc: no visible binding for '<<-' assignment to ‘mean_u’
  rUL_fc: no visible binding for global variable ‘var_u’
  rUL_fc: no visible binding for global variable ‘pp_mu’
  rUL_fc: no visible binding for global variable ‘pm_mu’
  rUL_fc: no visible binding for global variable ‘n’
  rUL_fc: no visible binding for global variable ‘mean_u’
  rUL_fc: no visible binding for global variable ‘pp_l’
  rZ_fc: no visible binding for global variable ‘X’
  rZ_fc: no visible binding for global variable ‘b’
  rZ_fc: no visible binding for global variable ‘UL’
  rZ_fc: no visible binding for global variable ‘pp_zq’
  rZ_fc: no visible binding for global variable ‘Ranks’
  rZ_fc: no visible binding for global variable ‘uRanks’
  rZ_fc: no visible binding for global variable ‘n’
  rb_fc: no visible binding for global variable ‘Z’
  rb_fc: no visible binding for global variable ‘UL’
  rb_fc: no visible binding for global variable ‘pm_b’
  rb_fc: no visible binding for global variable ‘xtx’
  rb_fc: no visible binding for global variable ‘pp_b’
  rb_fc: no visible binding for global variable ‘tx’
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... NOTE
  S3 methods shown with full name in documentation object 'plot.eigenmodel_post':
  ‘plot.eigenmodel_post’
  
  The \usage entries for S3 methods should use the \method markup and not
  their full name.
  See the chapter ‘Writing R documentation files’ in the ‘Writing R
  Extensions’ manual.
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... WARNING
  Warning: large data file(s) saved inefficiently:
  size ASCII compress
  YX_Friend.rda 192Kb FALSE none
  Y_Gen.rda 199Kb FALSE none
  Y_Pro.rda 419Kb FALSE none
  
  Note: significantly better compression could be obtained
  by using R CMD build --resave-data
  old_size new_size compress
  YX_Friend.rda 192Kb 2Kb bzip2
  Y_Gen.rda 199Kb 3Kb bzip2
  Y_Pro.rda 419Kb 3Kb bzip2
• checking examples ... OK
• checking PDF version of manual ... OK
  WARNING: There was 1 warning, see
  ‘/home/hornik/tmp/R.check/r-patched/Work/PKGS/eigenmodel.Rcheck/00check.log’
  for details