- using R version 2.14.1 Patched (2012-02-05 r58287)
- using platform: i686-pc-linux-gnu (32-bit)
- using session charset: UTF-8
- checking for file ‘YaleToolkit/DESCRIPTION’ ... OK
- this is package ‘YaleToolkit’ version ‘3.2’
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... NOTE
As from R 2.14.0 all packages need a namespace.
One will be generated on installation, but it is better to handcraft a
NAMESPACE file: R CMD build will produce a suitable starting point.
- checking for executable files ... OK
- checking whether package ‘YaleToolkit’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... NOTE
barcode: warning in viewport(x = 0, y = 0, w = convertHeight(unit(1,
"npc"), "inches"), h = convertWidth(unit(1, "npc"), "inches"), just =
c("left", "bottom")): partial argument match of 'w' to 'width'
barcode: warning in viewport(x = 0, y = 0, w = convertHeight(unit(1,
"npc"), "inches"), h = convertWidth(unit(1, "npc"), "inches"), just =
c("left", "bottom")): partial argument match of 'h' to 'height'
barcode: warning in viewport(x = outer.margins$left, y =
outer.margins$bottom, w = unit(1, "npc") - outer.margins$right -
outer.margins$left, h = unit(1, "npc") - outer.margins$top -
outer.margins$bottom, just = thisjust, angle = thisangle, name =
"main", clip = "off"): partial argument match of 'w' to 'width'
barcode: warning in viewport(x = outer.margins$left, y =
outer.margins$bottom, w = unit(1, "npc") - outer.margins$right -
outer.margins$left, h = unit(1, "npc") - outer.margins$top -
outer.margins$bottom, just = thisjust, angle = thisangle, name =
"main", clip = "off"): partial argument match of 'h' to 'height'
barcode.panel: warning in viewport(x = xleftoffset, y = unit(0, "npc"),
w = unit(1, "npc") - xleftoffset - xrightoffset, h = unit(1, "npc"),
xscale = c(minx, maxx), just = c("left", "bottom")): partial argument
match of 'w' to 'width'
barcode.panel: warning in viewport(x = xleftoffset, y = unit(0, "npc"),
w = unit(1, "npc") - xleftoffset - xrightoffset, h = unit(1, "npc"),
xscale = c(minx, maxx), just = c("left", "bottom")): partial argument
match of 'h' to 'height'
barcode.panel: warning in viewport(x = xleftoffset, y = unit((i - 1)/K,
"npc") + unit(0.05/K, "npc"), w = unit(1, "npc") - xleftoffset -
xrightoffset, h = unit(1/K, "npc") * bcspace - unit(0.05/K, "npc"),
xscale = c(minx, maxx), yscale = c(0, 1), just = c("left", "bottom"),
name = "barcode", clip = "off"): partial argument match of 'w' to
'width'
barcode.panel: warning in viewport(x = xleftoffset, y = unit((i - 1)/K,
"npc") + unit(0.05/K, "npc"), w = unit(1, "npc") - xleftoffset -
xrightoffset, h = unit(1/K, "npc") * bcspace - unit(0.05/K, "npc"),
xscale = c(minx, maxx), yscale = c(0, 1), just = c("left", "bottom"),
name = "barcode", clip = "off"): partial argument match of 'h' to
'height'
barcode.panel: warning in viewport(x = xleftoffset, y = unit((i - 1)/K,
"npc") + unit(1/K, "npc") * bcspace, w = unit(1, "npc") -
xrightoffset - xleftoffset, h = unit(1/K, "npc") - unit(1/K, "npc") *
bcspace, xscale = c(minx, maxx), yscale = c(0, 1), just = c("left",
"bottom"), name = "hist", clip = "off"): partial argument match of
'w' to 'width'
barcode.panel: warning in viewport(x = xleftoffset, y = unit((i - 1)/K,
"npc") + unit(1/K, "npc") * bcspace, w = unit(1, "npc") -
xrightoffset - xleftoffset, h = unit(1/K, "npc") - unit(1/K, "npc") *
bcspace, xscale = c(minx, maxx), yscale = c(0, 1), just = c("left",
"bottom"), name = "hist", clip = "off"): partial argument match of
'h' to 'height'
barcode.panel: warning in viewport(x = 0, y = 0.05, w = 1, h = 0.9,
just = c("left", "bottom"), xscale = c(minx, maxx), yscale = c(0,
1)): partial argument match of 'w' to 'width'
barcode.panel: warning in viewport(x = 0, y = 0.05, w = 1, h = 0.9,
just = c("left", "bottom"), xscale = c(minx, maxx), yscale = c(0,
1)): partial argument match of 'h' to 'height'
gpairs : boxplot.panel: warning in panel.stripplot(cont.var, cat.var,
horizontal = horiz, jitter = stripplot.pars$jitter, col =
stripplot.pars$col, cex = stripplot.pars$size, pch =
stripplot.pars$pch): partial argument match of 'jitter' to
'jitter.data'
gpairs : boxplot.panel: warning in panel.stripplot(cat.var, cont.var,
horizontal = horiz, jitter = stripplot.pars$jitter, col =
stripplot.pars$col, cex = stripplot.pars$size, pch =
stripplot.pars$pch): partial argument match of 'jitter' to
'jitter.data'
gpairs: warning in viewport(x = outer.margins$bottom, y =
outer.margins$left, w = unit(1, "npc") - outer.margins$right -
outer.margins$left, h = unit(1, "npc") - outer.margins$top -
outer.margins$bottom, just = c("left", "bottom"), name = "main", clip
= "off"): partial argument match of 'w' to 'width'
gpairs: warning in viewport(x = outer.margins$bottom, y =
outer.margins$left, w = unit(1, "npc") - outer.margins$right -
outer.margins$left, h = unit(1, "npc") - outer.margins$top -
outer.margins$bottom, just = c("left", "bottom"), name = "main", clip
= "off"): partial argument match of 'h' to 'height'
gpairs: warning in viewport(x = (labelj - 1)/N, y = 1 - i/N, w = 1/N, h
= 1/N, just = c("left", "bottom"), name = as.character(i * N + j)):
partial argument match of 'w' to 'width'
gpairs: warning in viewport(x = (labelj - 1)/N, y = 1 - i/N, w = 1/N, h
= 1/N, just = c("left", "bottom"), name = as.character(i * N + j)):
partial argument match of 'h' to 'height'
gpairs: warning in viewport(x = 0.5, y = 0.5, w = 1 - gap, h = 1 - gap,
just = c("center", "center"), name = paste("IN", as.character(i * N +
j))): partial argument match of 'w' to 'width'
gpairs: warning in viewport(x = 0.5, y = 0.5, w = 1 - gap, h = 1 - gap,
just = c("center", "center"), name = paste("IN", as.character(i * N +
j))): partial argument match of 'h' to 'height'
sparkline: warning in viewport(x = margins[2], y = margins[1], w =
unit(1, "npc") - margins[2] - margins[4], h = unit(1, "npc") -
margins[1] - margins[3], just = c("left", "bottom")): partial
argument match of 'w' to 'width'
sparkline: warning in viewport(x = margins[2], y = margins[1], w =
unit(1, "npc") - margins[2] - margins[4], h = unit(1, "npc") -
margins[1] - margins[3], just = c("left", "bottom")): partial
argument match of 'h' to 'height'
sparkline: warning in viewport(x = unit(0.5, "npc"), y = unit(0.5,
"npc"), w = unit(1, "npc"), h = unit(1, "npc"), xscale = xlim, yscale
= ylim, just = "center"): partial argument match of 'w' to 'width'
sparkline: warning in viewport(x = unit(0.5, "npc"), y = unit(0.5,
"npc"), w = unit(1, "npc"), h = unit(1, "npc"), xscale = xlim, yscale
= ylim, just = "center"): partial argument match of 'h' to 'height'
sparkline: warning in viewport(x = unit(0.5, "npc"), y = unit(0.5,
"npc"), w = unit(1, "npc"), h = unit(1, "npc") - 2 * buffer, xscale =
unit(xlim, "native"), yscale = unit(ylim, "native"), just =
"center"): partial argument match of 'w' to 'width'
sparkline: warning in viewport(x = unit(0.5, "npc"), y = unit(0.5,
"npc"), w = unit(1, "npc"), h = unit(1, "npc") - 2 * buffer, xscale =
unit(xlim, "native"), yscale = unit(ylim, "native"), just =
"center"): partial argument match of 'h' to 'height'
sparklines: warning in viewport(x = outer.margin[2], y =
outer.margin[1], w = unit(1, "npc") - outer.margin[2] -
outer.margin[4], h = unit(1, "npc") - outer.margin[1] -
outer.margin[3], just = c("left", "bottom")): partial argument match
of 'w' to 'width'
sparklines: warning in viewport(x = outer.margin[2], y =
outer.margin[1], w = unit(1, "npc") - outer.margin[2] -
outer.margin[4], h = unit(1, "npc") - outer.margin[1] -
outer.margin[3], just = c("left", "bottom")): partial argument match
of 'h' to 'height'
sparkmat: warning in viewport(x = 0.15, y = 0.1, w = 0.75, h = 0.75,
just = c("left", "bottom"), xscale = range(pretty(locs[, 1])), yscale
= range(pretty(locs[, 2]))): partial argument match of 'w' to 'width'
sparkmat: warning in viewport(x = 0.15, y = 0.1, w = 0.75, h = 0.75,
just = c("left", "bottom"), xscale = range(pretty(locs[, 1])), yscale
= range(pretty(locs[, 2]))): partial argument match of 'h' to
'height'
sparkmat: warning in viewport(x = xloc, y = yloc, just = just, w = w, h
= h): partial argument match of 'w' to 'width'
sparkmat: warning in viewport(x = xloc, y = yloc, just = just, w = w, h
= h): partial argument match of 'h' to 'height'
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... NOTE
Note: significantly better compression could be obtained
by using R CMD build --resave-data
old_size new_size compress
Leaves.rda 69Kb 10Kb bzip2
NewHavenResidential.rda 161Kb 91Kb xz
YaleEnergy.rda 26Kb 18Kb xz
nasa.rda 110Kb 69Kb xz
- checking examples ... OK
- checking PDF version of manual ... OK