• using R version 2.14.1 Patched (2012-02-05 r58287)
  • using platform: i686-pc-linux-gnu (32-bit)
  • using session charset: UTF-8
  • checking for file ‘SMPracticals/DESCRIPTION’ ... OK
  • this is package ‘SMPracticals’ version ‘1.3-1’
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... NOTE
    As from R 2.14.0 all packages need a namespace.
    One will be generated on installation, but it is better to handcraft a
    NAMESPACE file: R CMD build will produce a suitable starting point.
  • checking for executable files ... OK
  • checking whether package ‘SMPracticals’ can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    File ‘SMPracticals/R/zzz.R’:
    .First.lib calls:
    require(ellipse)

    Package startup functions should not change the search path.
    See section ‘Good practice’ in ?.onAttach.

    pairs.mod : doaxis: warning in round(at, dig = 2): partial argument
    match of 'dig' to 'digits'
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... NOTE
    S3 methods shown with full name in documentation object 'pairs.mod':
    ‘pairs.mod’

    S3 methods shown with full name in documentation object 'plot.glm.diag':
    ‘plot.glm.diag’

    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See the chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... NOTE
    ‘library’ or ‘require’ calls not declared from:
    ‘MASS’ ‘nlme’ ‘survival’
    ‘data(package=)’ call not declared from: ‘MASS’
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... NOTE

    Note: significantly better compression could be obtained
    by using R CMD build --resave-data
    old_size new_size compress
    danish.rda 39Kb 15Kb xz
    ftse.rda 44Kb 15Kb xz
    pbc.rda 70Kb 9Kb xz
    quake.rda 13Kb 4Kb bzip2
    soccer.rda 16Kb 2Kb bzip2
    tide.rda 13Kb 2Kb bzip2
    yahoo.rda 16Kb 5Kb gzip
  • checking examples ... OK
  • checking PDF version of manual ... OK