- using R version 2.14.1 Patched (2012-02-05 r58287)
- using platform: i686-pc-linux-gnu (32-bit)
- using session charset: UTF-8
- checking for file ‘RobLox/DESCRIPTION’ ... OK
- this is package ‘RobLox’ version ‘0.8’
- package encoding: latin1
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking whether package ‘RobLox’ can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking R/sysdata.rda ... OK
- checking examples ... OK
- checking differences from ‘RobLox-Ex.Rout’ to ‘RobLox-Ex.Rout.save’ ...
6,7c6,7
< 'browseVignettes()'. To cite Bioconductor, see
< 'citation("Biobase")' and for packages 'citation("pkgname")'.
---
> 'openVignette()'. To cite Bioconductor, see
> 'citation("Biobase")' and for packages 'citation(pkgname)'.
9c9
< :startupmsg> Utilities for start-up messages (version 0.7.2)
---
> :startupmsg> Utilities for start-up messages (version 0.7.1)
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< :SweaveListingUtils> TeX listings package (version
< :SweaveListingUtils> 0.5.5)
---
> :SweaveListingUtils> TeX listings package (version 0.5)
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< :distr> 2.3.3)
---
> :distr> 2.3)
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< :distrEx> Extensions of package distr (version 2.3.1)
---
> :distrEx> Extensions of package distr (version 2.3)
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< :RandVar> Implementation of random variables (version 0.8.1)
---
> :RandVar> Implementation of random variables (version 0.8)
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< :distrMod> (version 2.3.1)
---
> :distrMod> (version 2.3)
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< :RobAStBase> Robust Asymptotic Statistics (version 0.8.1)
---
> :RobAStBase> Robust Asymptotic Statistics (version 0.8)
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> The following object(s) are masked from 'package:stats':
>
> start
>
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< precision of centering: -1.753814e-17 1.265596e-05
---
> precision of centering: 8.833545e-17 1.265596e-05
269,270c272,273
< mean 1.652391e-05 -1.204241e-16
< sd -6.607366e-17 -8.653862e-07
---
> mean 1.652391e-05 -1.822532e-17
> sd 3.168531e-17 -8.653862e-07
312,313c315,316
< [1,] -0.09216816 1.1317057
< [2,] 0.10169428 0.9520219
---
> [1,] -0.09216816 1.131706
> [2,] 0.10169428 0.952022
379c382
< [1] 1.01198
---
> [1] 1.011980
406,407c409,410
< Fisher consistency of eta.loc: -1.743791e-10
< centering of eta.sc: -3.904036e-10
---
> Fisher consistency of eta.loc: -1.743783e-10
> centering of eta.sc: -3.904033e-10
409c412
< MSE equation: 1.20598e-14
---
> MSE equation: 1.207368e-14
415,416c418,419
< mean -1.10248e-06 0.000000e+00
< sd 0.00000e+00 -1.685676e-05
---
> mean -1.102480e-06 0.000000e+00
> sd 0.000000e+00 -1.685676e-05
441,442c444,445
< [1,] 1.05189 0.0000000
< [2,] 0.00000 0.5958748
---
> [1,] 1.051890 0.0000000
> [2,] 0.000000 0.5958748
511c514
< sd: 0.940296140129344
---
> sd: 0.940296140129343
611,612c614,615
< -0.11948046 0.93185534
< ( 0.10902205) ( 0.09685851)
---
> -0.1194805 0.9318553
> ( 0.1090220) ( 0.0968585)
615,616c618,619
< [1,] 1.188581 0.0000000
< [2,] 0.000000 0.9381571
---
> [1,] 1.188581 0.000000
> [2,] 0.000000 0.938157
687c690
< 0.9945519
---
> 0.994552
823c826
< precision of centering: 0 -6.569591e-07
---
> precision of centering: 0 -6.56959e-07
911,912c914,915
< mean -8.538336e-07 0.000000e+00
< sd 0.000000e+00 -9.691769e-06
---
> mean -8.538336e-07 0.00000e+00
> sd 0.000000e+00 -9.69177e-06
914c917
< 9.691769e-06
---
> 9.69177e-06
990c993
< precision of centering: 0 -6.569591e-07
---
> precision of centering: 0 -6.56959e-07
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< precision of centering: 0 -1.52497e-06
---
> precision of centering: 0 -1.524970e-06
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< precision of centering: 0 -6.569591e-07
---
> precision of centering: 0 -6.56959e-07
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< precision of centering: 9.590965e-21 9.579943e-06
---
> precision of centering: -1.418367e-20 9.579943e-06
1243,1244c1246,1247
< mean 1.646253e-05 1.380937e-20
< sd 1.105734e-21 2.094876e-05
---
> mean 1.646253e-05 -8.358660e-22
> sd 1.313976e-21 2.094876e-05
1405c1408
< precision of centering: 0 -6.569591e-07
---
> precision of centering: 0 -6.56959e-07
1417c1420
< [1] 2.41339
---
> [1] 2.413390
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< precision of centering: -3.31894e-17 -5.989196e-07
---
> precision of centering: 6.748239e-17 -5.989196e-07
1504,1505c1507,1508
< mean -2.427446e-06 -3.626874e-17
< sd -4.876218e-17 -8.116850e-06
---
> mean -2.427446e-06 3.688845e-17
> sd 1.051323e-16 -8.116850e-06
1510c1513
< [1] 2.62691
---
> [1] 2.626910
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< precision of centering: -1.753814e-17 1.265596e-05
---
> precision of centering: 8.833545e-17 1.265596e-05
1590,1591c1593,1594
< mean 1.652391e-05 -1.204241e-16
< sd -6.607366e-17 -8.653862e-07
---
> mean 1.652391e-05 -1.822532e-17
> sd 3.168531e-17 -8.653862e-07
1711,1712c1714,1715
< [1,] 1.04862 0.0000000
< [2,] 0.00000 0.5779013
---
> [1,] 1.048620 0.0000000
> [2,] 0.000000 0.5779013
1810,1811c1813,1814
< [1,] -0.028278572 0.9274339
< [2,] -0.001566506 1.0511230
---
> [1,] -0.028278572 0.927434
> [2,] -0.001566506 1.051123
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< [1,] -0.028278572 0.9274339
< [2,] -0.001566506 1.0511230
---
> [1,] -0.028278572 0.927434
> [2,] -0.001566506 1.051123
2134,2139c2137,2142
< n x empMSE (loc) 1.151729 1.571687 1.0217407 1.0412422
< relMSE (loc) 1.106111 1.509434 0.9812710 1.0000000
< n x empMSE (scale) 1.086260 1.493500 0.7204599 0.6113725
< relMSE (scale) 1.776757 2.442864 1.1784303 1.0000000
< n x empMSE (loc + scale) 2.237989 3.065187 1.7422006 1.6526147
< relMSE (loc + scale) 1.354211 1.854750 1.0542086 1.0000000
---
> n x empMSE (loc) 1.151729 1.571687 1.0217401 1.0412422
> relMSE (loc) 1.106111 1.509434 0.9812703 1.0000000
> n x empMSE (scale) 1.086260 1.493500 0.7204555 0.6113725
> relMSE (scale) 1.776757 2.442864 1.1784231 1.0000000
> n x empMSE (loc + scale) 2.237989 3.065187 1.7421956 1.6526147
> relMSE (loc + scale) 1.354211 1.854750 1.0542055 1.0000000
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< pdf
---
> postscript
OK
- checking PDF version of manual ... OK