• using R version 2.6.2 RC (2008-02-04 r44320)
  • checking for file 'apTreeshape/DESCRIPTION' ... OK
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  • this is package 'apTreeshape' version '1.4-0'
  • checking package dependencies ... OK
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  • checking if this is a source package ... OK
    •
  • checking whether package 'apTreeshape' can be installed ... OK
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  • checking package directory ... OK
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  • checking for portable file names ... OK
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  • checking DESCRIPTION meta-information ... OK
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  • checking top-level files ... OK
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  • checking index information ... OK
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  • checking package subdirectories ... OK
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  • checking R files for non-ASCII characters ... OK
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  • checking R files for syntax errors ... OK
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  • checking whether the package can be loaded ... OK
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  • checking whether the package can be loaded with stated dependencies ... OK
    •
  • checking for unstated dependencies in R code ... OK
    •
  • checking S3 generic/method consistency ... OK
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  • checking replacement functions ... OK
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  • checking foreign function calls ... OK
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  • checking R code for possible problems ... OK
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  • checking Rd files ... WARNING
    Rd files with unknown encoding:
    cladesize.Rd
    cutreeshape.Rd
    dbtrees.Rd
    likelihood.test.Rd
    rtreeshape.Rd
    sackin.Rd
    shape.statistic.Rd
    subtree.test.Rd
    summary.treeshape.Rd
    tipsubtree.Rd
    treeshape.Rd

    See the chapter 'Writing R documentation files' in manual 'Writing R
    Extensions'.
  • checking Rd cross-references ... OK
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  • checking for missing documentation entries ... OK
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  • checking for code/documentation mismatches ... OK
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  • checking Rd \usage sections ... OK
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  • checking data for non-ASCII characters ... OK
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  • creating apTreeshape-Ex.R ... OK
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  • checking examples ... OK
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  • creating apTreeshape-manual.tex ... OK
    •
  • checking apTreeshape-manual.tex ... OK
    •