Using auto-selected zip options ' AnalyzeFMRI-HELP=ziponly'
---------- Making package AnalyzeFMRI ------------
adding build stamp to DESCRIPTION
making DLL ...
making analyzeFMRI.d from analyzeFMRI.c
making niftiFMRI.d from niftiFMRI.c
making sim.3d.GRF.d from sim.3d.GRF.c
making spatial.d from spatial.c
making spatial.est.d from spatial.est.c
making spatial.filters.non.linear.d from spatial.filters.non.linear.c
making spatial.mixture.d from spatial.mixture.c
gcc-sjlj -std=gnu99 -Id:/Rcompile/recent/R-26~1.2/include -O3 -Wall -c analyzeFMRI.c -o analyzeFMRI.o
gcc-sjlj -std=gnu99 -Id:/Rcompile/recent/R-26~1.2/include -O3 -Wall -c niftiFMRI.c -o niftiFMRI.o
niftiFMRI.c: In function 'writefloatappend_JM':
niftiFMRI.c:421: warning: 'extension' is used uninitialized in this function
niftiFMRI.c: In function 'write2byteappend_JM':
niftiFMRI.c:397: warning: 'extension' is used uninitialized in this function
niftiFMRI.c: In function 'write8bitappend_JM':
niftiFMRI.c:369: warning: 'extension' is used uninitialized in this function
gcc-sjlj -std=gnu99 -Id:/Rcompile/recent/R-26~1.2/include -O3 -Wall -c sim.3d.GRF.c -o sim.3d.GRF.o
gcc-sjlj -std=gnu99 -Id:/Rcompile/recent/R-26~1.2/include -O3 -Wall -c spatial.c -o spatial.o
gcc-sjlj -std=gnu99 -Id:/Rcompile/recent/R-26~1.2/include -O3 -Wall -c spatial.est.c -o spatial.est.o
gcc-sjlj -std=gnu99 -Id:/Rcompile/recent/R-26~1.2/include -O3 -Wall -c spatial.filters.non.linear.c -o spatial.filters.non.linear.o
gcc-sjlj -std=gnu99 -Id:/Rcompile/recent/R-26~1.2/include -O3 -Wall -c spatial.mixture.c -o spatial.mixture.o
gfortran-sjlj -O3 -c lsame.f -o lsame.o
gfortran-sjlj -O3 -c sblas.f -o sblas.o
gfortran-sjlj -O3 -c slamc.f -o slamc.o
gfortran-sjlj -O3 -c slapack.f -o slapack.o
gfortran-sjlj -O3 -c spatial.filters.linear.f -o spatial.filters.linear.o
windres --preprocessor="gcc-sjlj -E -xc -DRC_INVOKED" -I d:/Rcompile/recent/R-26~1.2/include -i AnalyzeFMRI_res.rc -o AnalyzeFMRI_res.o
gcc-sjlj -std=gnu99 -shared -s -o AnalyzeFMRI.dll AnalyzeFMRI.def analyzeFMRI.o niftiFMRI.o sim.3d.GRF.o spatial.o spatial.est.o spatial.filters.non.linear.o spatial.mixture.o lsame.o sblas.o slamc.o slapack.o spatial.filters.linear.o AnalyzeFMRI_res.o -Ld:/Rcompile/recent/R-26~1.2/bin -lgfortran -lR
... DLL made
installing DLL
installing R files
installing inst files
installing man source files
installing indices
Warning message:
In tools:::win.packages.html(.Library) : cannot update HTML package index
installing help
Note: unmatched right brace in 'EC.3D' on or after line 40
Note: unmatched right brace in 'EC.3D.Rd' on or after line 40
>>> Building/Updating help pages for package 'AnalyzeFMRI'
Formats: text html latex example chm
EC.3D text html latex example chm
GaussSmoothArray text html latex example chm
GaussSmoothKernel text html latex example chm
N2G.Class.Probability text html latex chm
N2G.Density text html latex chm
N2G.Fit text html latex chm
N2G.Inverse text html latex chm
N2G.Likelihood.Ratio text html latex chm
N2G.Likelihood text html latex chm
N2G text html latex example chm
N2G.Region text html latex chm
N2G.Spatial.Mixture text html latex example chm
N2G.Transform text html latex chm
NonLinearSmoothArray text html latex example chm
Sim.3D.GRF text html latex example chm
Sim.3D.GammaRF text html latex example chm
SmoothEst text html latex example chm
Threshold.Bonferroni text html latex example chm
Threshold.FDR text html latex example chm
Threshold.RF text html latex example chm
cluster.threshold text html latex example chm
cov.est text html latex example chm
f.analyze.file.summary text html latex example chm
f.analyzeIO.gui text html latex chm
f.basic.hdr.list.create text html latex example chm
f.basic.hdr.nifti.list.create text html latex example chm
f.ica.fmri text html latex chm
f.ica.fmri.gui text html latex chm
f.nifti.file.summary text html latex example chm
f.plot.ica.fmri text html latex chm
f.plot.ica.fmri.jpg text html latex chm
f.read.analyze.header text html latex example chm
f.read.analyze.slice text html latex example chm
f.read.analyze.slice.at.all.timep text html latex example chm
f.read.analyze.tpt text html latex example chm
f.read.analyze.ts text html latex example chm
f.read.analyze.volume text html latex example chm
f.read.header text html latex example chm
f.read.nifti.header text html latex example chm
f.read.nifti.slice text html latex example chm
f.read.nifti.slice.at.all.timepoi text html latex example chm
f.read.nifti.tpt text html latex example chm
f.read.nifti.ts text html latex example chm
f.read.nifti.volume text html latex example chm
f.spectral.summary text html latex chm
f.spectral.summary.nifti text html latex chm
f.write.analyze text html latex example chm
f.write.array.to.img.2bytes text html latex chm
f.write.array.to.img.8bit text html latex chm
f.write.array.to.img.float text html latex chm
f.write.list.to.hdr text html latex example chm
f.write.list.to.hdr.nifti text html latex example chm
f.write.nifti text html latex example chm
f.write.nii.array.to.img.2bytes text html latex chm
f.write.nii.array.to.img.8bit text html latex chm
f.write.nii.array.to.img.float text html latex chm
model.2.cov.func text html latex chm
model.2.est.gamma text html latex chm
zipping help files
Microsoft HTML Help Compiler 4.74.8702
Compiling d:\Rcompile\CRANpkg\local\2.6\AnalyzeFMRI\chm\AnalyzeFMRI.chm
Compile time: 0 minutes, 0 seconds
59 Topics
307 Local links
0 Internet links
1 Graphic
Created d:\Rcompile\CRANpkg\local\2.6\AnalyzeFMRI\chm\AnalyzeFMRI.chm, 63,526 bytes
Compression decreased file by 98,830 bytes.
preparing package AnalyzeFMRI for lazy loading
Loading required package: tcltk
Loading Tcl/Tk interface ... done
adding MD5 sums
packaged installation of package 'AnalyzeFMRI' as AnalyzeFMRI_1.1-10.zip
* DONE (AnalyzeFMRI)