• using R version 2.11.1 Patched (2010-07-29 r52657)
• using session charset: ISO8859-1
• checking for file 'robust/DESCRIPTION' ... OK
• this is package 'robust' version '0.3-11'
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking whether package 'robust' can be installed ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  lmRob.fit.compute: no visible global function definition for
  'guiDisplayDialog'
  lmRob.fit.compute: no visible binding for global variable 'yes.p'
  plot.covfm: no visible global function definition for 'guiModify'
  plot.glmfm: no visible global function definition for 'guiModify'
  plot.lmfm: no visible global function definition for 'guiModify'
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking data for non-ASCII characters ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable compilation flags in Makevars ... OK
• checking for portable use of $BLAS_LIBS ... OK
• checking examples ... OK
• checking differences from 'robust-Ex.Rout' to 'robust-Ex.Rout.save' ...
  1d0
  < > options(pager = "console")
  3c2,3
  < Scalable Robust Estimators with High Breakdown Point (version 1.2-01)
  ---
  > pcaPP 0.1-1 loaded
  > Scalable Robust Estimators with High Breakdown Point (version 0.5-02)
  7c7,8
  < The following object(s) are masked from 'package:stats':
  ---
  >
  > The following object(s) are masked from package:stats :
  13,14c14,15
  < > cleanEx()
  < > nameEx("add1.lmRob")
  ---
  > > assign(".oldNS", loadedNamespaces(), pos = 'CheckExEnv')
  > > cleanEx(); nameEx("add1.lmRob")
  43,44c44
  < > cleanEx()
  < > nameEx("anova.glmRob")
  ---
  > > cleanEx(); nameEx("anova.glmRob")
  82,83c82
  < > cleanEx()
  < > nameEx("anova.lmRob")
  ---
  > > cleanEx(); nameEx("anova.lmRob")
  113,114c112,113
  < [1,] 1 1
  < [2,] 2 1 1 27.354 9.84e-08 ***
  ---
  > [1,] 1.000 1.000
  > [2,] 2.000 1.000 1 27.354 9.84e-08 ***
  120,121c119
  < > cleanEx()
  < > nameEx("arg.names")
  ---
  > > cleanEx(); nameEx("arg.names")
  138,139c136
  < > cleanEx()
  < > nameEx("breslow.dat")
  ---
  > > cleanEx(); nameEx("breslow.dat")
  155,156c152
  < > cleanEx()
  < > nameEx("ccov")
  ---
  > > cleanEx(); nameEx("ccov")
  186,187c182
  < > cleanEx()
  < > nameEx("coef.glmfm")
  ---
  > > cleanEx(); nameEx("coef.glmfm")
  210,211c205
  < > cleanEx()
  < > nameEx("coef.lmfm")
  ---
  > > cleanEx(); nameEx("coef.lmfm")
  232,233c226
  < > cleanEx()
  < > nameEx("covRob")
  ---
  > > cleanEx(); nameEx("covRob")
  263,264c256
  < > cleanEx()
  < > nameEx("covRob.control")
  ---
  > > cleanEx(); nameEx("covRob.control")
  284,285c276
  < > cleanEx()
  < > nameEx("covfmDistance2Plot")
  ---
  > > cleanEx(); nameEx("covfmDistance2Plot")
  304,305c295
  < > cleanEx()
  < > nameEx("covfmEllipsesPlot")
  ---
  > > cleanEx(); nameEx("covfmEllipsesPlot")
  324,325c314
  < > cleanEx()
  < > nameEx("covfmScreePlot")
  ---
  > > cleanEx(); nameEx("covfmScreePlot")
  344,345c333
  < > cleanEx()
  < > nameEx("covfmSqrtMDPlot")
  ---
  > > cleanEx(); nameEx("covfmSqrtMDPlot")
  364,365c352
  < > cleanEx()
  < > nameEx("drop1.lmRob")
  ---
  > > cleanEx(); nameEx("drop1.lmRob")
  396,397c383
  < > cleanEx()
  < > nameEx("fit.models")
  ---
  > > cleanEx(); nameEx("fit.models")
  420,421c406
  < > cleanEx()
  < > nameEx("get.fit.models.database")
  ---
  > > cleanEx(); nameEx("get.fit.models.database")
  515,516c500
  < > cleanEx()
  < > nameEx("glmRob")
  ---
  > > cleanEx(); nameEx("glmRob")
  547,548c531
  < > cleanEx()
  < > nameEx("glmRob.mallows")
  ---
  > > cleanEx(); nameEx("glmRob.mallows")
  576,577c559
  < > cleanEx()
  < > nameEx("glmRob.misclass")
  ---
  > > cleanEx(); nameEx("glmRob.misclass")
  607,608c589
  < > cleanEx()
  < > nameEx("leuk.dat")
  ---
  > > cleanEx(); nameEx("leuk.dat")
  624,625c605
  < > cleanEx()
  < > nameEx("lmRob")
  ---
  > > cleanEx(); nameEx("lmRob")
  642,643c622
  < > cleanEx()
  < > nameEx("lmRob.RFPE")
  ---
  > > cleanEx(); nameEx("lmRob.RFPE")
  662,663c641
  < > cleanEx()
  < > nameEx("lmRob.control")
  ---
  > > cleanEx(); nameEx("lmRob.control")
  681,682c659
  < > cleanEx()
  < > nameEx("mallows.dat")
  ---
  > > cleanEx(); nameEx("mallows.dat")
  698,699c675
  < > cleanEx()
  < > nameEx("methods.glmRob")
  ---
  > > cleanEx(); nameEx("methods.glmRob")
  878,879c854
  < > cleanEx()
  < > nameEx("methods.lmRob")
  ---
  > > cleanEx(); nameEx("methods.lmRob")
  966,967c941
  < > cleanEx()
  < > nameEx("plot.covfm")
  ---
  > > cleanEx(); nameEx("plot.covfm")
  991,992c965
  < > cleanEx()
  < > nameEx("plot.lmRob")
  ---
  > > cleanEx(); nameEx("plot.lmRob")
  1010,1011c983
  < > cleanEx()
  < > nameEx("plot.lmfm")
  ---
  > > cleanEx(); nameEx("plot.lmfm")
  1029,1030c1001
  < > cleanEx()
  < > nameEx("predict.glmRob")
  ---
  > > cleanEx(); nameEx("predict.glmRob")
  1064,1065c1035
  < > cleanEx()
  < > nameEx("predict.lmRob")
  ---
  > > cleanEx(); nameEx("predict.lmRob")
  1104,1105c1074
  < > cleanEx()
  < > nameEx("print.covfm")
  ---
  > > cleanEx(); nameEx("print.covfm")
  1178,1179c1147
  < > cleanEx()
  < > nameEx("print.glmRob")
  ---
  > > cleanEx(); nameEx("print.glmRob")
  1222,1223c1190
  < > cleanEx()
  < > nameEx("print.glmfm")
  ---
  > > cleanEx(); nameEx("print.glmfm")
  1280,1281c1247
  < > cleanEx()
  < > nameEx("print.lmRob")
  ---
  > > cleanEx(); nameEx("print.lmRob")
  1318,1319c1284
  < > cleanEx()
  < > nameEx("print.lmfm")
  ---
  > > cleanEx(); nameEx("print.lmfm")
  1352,1353c1317
  < > cleanEx()
  < > nameEx("print.summary.covfm")
  ---
  > > cleanEx(); nameEx("print.summary.covfm")
  1456,1457c1420
  < > cleanEx()
  < > nameEx("print.summary.glmRob")
  ---
  > > cleanEx(); nameEx("print.summary.glmRob")
  1535,1536c1498
  < > cleanEx()
  < > nameEx("print.summary.glmfm")
  ---
  > > cleanEx(); nameEx("print.summary.glmfm")
  1614,1615c1576
  < > cleanEx()
  < > nameEx("print.summary.lmRob")
  ---
  > > cleanEx(); nameEx("print.summary.lmRob")
  1654,1655c1615
  < > cleanEx()
  < > nameEx("print.summary.lmfm")
  ---
  > > cleanEx(); nameEx("print.summary.lmfm")
  1743,1744c1703
  < > cleanEx()
  < > nameEx("stack.dat")
  ---
  > > cleanEx(); nameEx("stack.dat")
  1783,1784c1742
  < > cleanEx()
  < > nameEx("step.lmRob")
  ---
  > > cleanEx(); nameEx("step.lmRob")
  1855d1812
  < >
  1885,1886c1842
  < > cleanEx()
  < > nameEx("summary.covfm")
  ---
  > > cleanEx(); nameEx("summary.covfm")
  1911,1912c1867
  < > cleanEx()
  < > nameEx("summary.glmRob")
  ---
  > > cleanEx(); nameEx("summary.glmRob")
  1960,1961c1915
  < > cleanEx()
  < > nameEx("summary.glmfm")
  ---
  > > cleanEx(); nameEx("summary.glmfm")
  2010,2011c1964
  < > cleanEx()
  < > nameEx("summary.lmRob")
  ---
  > > cleanEx(); nameEx("summary.lmRob")
  2079,2080c2032
  < > cleanEx()
  < > nameEx("summary.lmfm")
  ---
  > > cleanEx(); nameEx("summary.lmfm")
  2133,2134c2085
  < > cleanEx()
  < > nameEx("weight.funs")
  ---
  > > cleanEx(); nameEx("weight.funs")
  2162,2163c2113
  < > cleanEx()
  < > nameEx("woodmod.dat")
  ---
  > > cleanEx(); nameEx("woodmod.dat")
  OK
• checking tests ... OK
• checking PDF version of manual ... OK