* Installing *source* package 'PHYLOGR' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
 >>> Building/Updating help pages for package 'PHYLOGR'
     Formats: text html latex example chm 
  GarlandJanis.IC                   text    html    latex   example chm
  GarlandJanis.Original             text    html    latex   example chm
  GarlandJanis.varcov               text    html    latex   example chm
Note: removing empty section \usage in file 'Helper.functions.Rd'
Note: removing empty section \arguments in file 'Helper.functions.Rd'
Note: removing empty section \usage in file 'Helper.functions.Rd'
Note: removing empty section \arguments in file 'Helper.functions.Rd'
  Helper.functions                  text    html    latex           chm
Warning: unmatched right brace in file 'Lacertid.IC.Rd' on line 22
Warning: unmatched right brace in file 'Lacertid.IC.Rd' on line 22
  Lacertid.IC                       text    html    latex   example chm
Warning: unmatched right brace in file 'Lacertid.Original.Rd' on line 28
Warning: unmatched right brace in file 'Lacertid.Original.Rd' on line 28
  Lacertid.Original                 text    html    latex   example chm
Warning: unmatched right brace in file 'Lacertid.varcov.Rd' on line 20
Warning: unmatched right brace in file 'Lacertid.varcov.Rd' on line 20
  Lacertid.varcov                   text    html    latex   example chm
Warning: unmatched right brace in file 'SimulExample.Rd' on line 10
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Warning: unmatched right brace in file 'SimulExample.Rd' on line 10
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  SimulExample                      text    html    latex   example chm
  cancor.phylog                     text    html    latex   example chm
  cor.origin                        text    html    latex   example chm
  lm.phylog                         text    html    latex   example chm
  matrix.D                          text    html    latex   example chm
  phylog.gls.fit                    text    html    latex   example chm
  plot.phylog.cancor                text    html    latex   example chm
  plot.phylog.lm                    text    html    latex   example chm
  plot.phylog.prcomp                text    html    latex   example chm
  prcomp.phylog                     text    html    latex   example chm
Note: removing empty section \examples in file 'print.summary.phylog.Rd'
Warning: invalid whitespace before brace in file 'print.summary.phylog.Rd' at '\item{x} { an object of the appropriate class.}'
Note: removing empty section \examples in file 'print.summary.phylog.Rd'
Warning: invalid whitespace before brace in file 'print.summary.phylog.Rd' at '\item{x} { an object of the appropriate class.}'
  print.summary.phylog              text    html    latex           chm
  read.inp.data                     text    html    latex   example chm
  read.pdi.data                     text    html    latex   example chm
  read.phylip.data                  text    html    latex   example chm
  read.phylog.matrix                text    html    latex   example chm
  read.sim.data                     text    html    latex   example chm
Warning: invalid whitespace before brace in file 'summary.phylog.cancor.Rd' at ' \item{original.LR.statistic} {the likelihood ratio statistic for the test that all canonical correlations are zero}'
Warning: invalid whitespace before brace in file 'summary.phylog.cancor.Rd' at ' \item{p.value.overall.test} {the p-value for the test that all canonical correlations are zero}'
Warning: invalid whitespace before brace in file 'summary.phylog.cancor.Rd' at ' \item{original.LR.statistic} {the likelihood ratio statistic for the test that all canonical correlations are zero}'
Warning: invalid whitespace before brace in file 'summary.phylog.cancor.Rd' at ' \item{p.value.overall.test} {the p-value for the test that all canonical correlations are zero}'
  summary.phylog.cancor             text    html    latex   example chm
  summary.phylog.lm                 text    html    latex   example chm
  summary.phylog.prcomp             text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\Rcompile\CRANpkg\local\2.9\PHYLOGR\chm\PHYLOGR.chm


Compile time: 0 minutes, 0 seconds
27	Topics
118	Local links
0	Internet links
1	Graphic


Created d:\Rcompile\CRANpkg\local\2.9\PHYLOGR\chm\PHYLOGR.chm, 56,148 bytes
Compression decreased file by 49,483 bytes.
** building package indices ...
** MD5 sums
* DONE (PHYLOGR)