- using R version 2.15.3 (2013-03-01)
- using platform: i386-w64-mingw32 (32-bit)
- using session charset: ISO8859-1
- checking for file 'tsDyn/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'tsDyn' version '0.9-2'
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking whether package 'tsDyn' can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
- loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of 'data' directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking compiled code ... OK
- checking sizes of PDF files under 'inst/doc' ... OK
- checking installed files from 'inst/doc' ... OK
- checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
- checking for unstated dependencies in tests ... OK
- checking tests ...
** running tests for arch 'i386' OK
Running '00SetarAndFriends.R'
Comparing '00SetarAndFriends.Rout' to '00SetarAndFriends.Rout.save' ...4,6c4,11
< This is mgcv 1.7-23. For overview type 'help("mgcv-package")'.
< Warning message:
< In initDefaultClusterOptions(libname) : NAs introduced by coercion
---
> This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
Running 'TVECM.sim.R'
Comparing 'TVECM.sim.Rout' to 'TVECM.sim.Rout.save' ...4,6c4,11
< This is mgcv 1.7-23. For overview type 'help("mgcv-package")'.
< Warning message:
< In initDefaultClusterOptions(libname) : NAs introduced by coercion
---
> This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
Running 'TVECM_HSTEST.R'
Comparing 'TVECM_HSTEST.Rout' to 'TVECM_HSTEST.Rout.save' ...4,6c4,11
< This is mgcv 1.7-23. For overview type 'help("mgcv-package")'.
< Warning message:
< In initDefaultClusterOptions(libname) : NAs introduced by coercion
---
> This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
Running 'VAR.R'
Comparing 'VAR.Rout' to 'VAR.Rout.save' ...4,6c4,11
< This is mgcv 1.7-23. For overview type 'help("mgcv-package")'.
< Warning message:
< In initDefaultClusterOptions(libname) : NAs introduced by coercion
---
> This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
78,79c83,84
< Equation cpiUSA -0.497252953 0.109356758 0.54022104 0.0237898927 -0.075679565
< Equation cpiCAN -0.269165140 0.196158934 0.33685344 -0.0136459469 -0.170361820
---
> Equation cpiUSA -0.497252953 0.109356758 0.54022105 0.0237898927 -0.075679565
> Equation cpiCAN -0.269165140 0.196158934 0.33685344 -0.0136459470 -0.170361820
86,87c91,92
< Equation cpiUSA -0.498754452 0.109946225 0.62254152 0.0160737110 -0.071308210
< Equation cpiCAN -0.275688576 0.194501980 0.33566340 0.0105541665 -0.148246352
---
> Equation cpiUSA -0.498754452 0.109946225 0.62254152 0.0160737109 -0.071308210
> Equation cpiCAN -0.275688576 0.194501980 0.33566340 0.0105541664 -0.148246352
94,95c99,100
< Equation cpiUSA -1.2277882 -0.495960965 0.109498610 0.52460627 0.0215467227
< Equation cpiCAN -0.6292711 -0.279172353 0.195060204 0.45779914 0.0037287342
---
> Equation cpiUSA -1.2277882 -0.495960965 0.109498610 0.52460627 0.0215467228
> Equation cpiCAN -0.6292711 -0.279172353 0.195060203 0.45779914 0.0037287342
103c108
< Equation cpiCAN 0.5992614 0.288801154 0.9771280000 -0.7214129 -0.268875466
---
> Equation cpiCAN 0.5992614 0.288801153 0.9771280000 -0.7214129 -0.268875466
223,224c228,229
< Equation cpiUSA -0.497252953 0.109356758 0.54022104 0.0237898927 -0.075679565
< Equation cpiCAN -0.269165140 0.196158934 0.33685344 -0.0136459469 -0.170361820
---
> Equation cpiUSA -0.497252953 0.109356758 0.54022105 0.0237898927 -0.075679565
> Equation cpiCAN -0.269165140 0.196158934 0.33685344 -0.0136459470 -0.170361820
233,234c238,239
< Equation cpiUSA -0.498754452 0.109946225 0.62254152 0.0160737110 -0.071308210
< Equation cpiCAN -0.275688576 0.194501980 0.33566340 0.0105541665 -0.148246352
---
> Equation cpiUSA -0.498754452 0.109946225 0.62254152 0.0160737109 -0.071308210
> Equation cpiCAN -0.275688576 0.194501980 0.33566340 0.0105541664 -0.148246352
243,244c248,249
< Equation cpiUSA -1.2277882 -0.495960965 0.109498610 0.52460627 0.0215467227
< Equation cpiCAN -0.6292711 -0.279172353 0.195060204 0.45779914 0.0037287342
---
> Equation cpiUSA -1.2277882 -0.495960965 0.109498610 0.52460627 0.0215467228
> Equation cpiCAN -0.6292711 -0.279172353 0.195060203 0.45779914 0.0037287342
254c259
< Equation cpiCAN 0.5992614 0.288801154 0.9771280000 -0.7214129 -0.268875466
---
> Equation cpiCAN 0.5992614 0.288801153 0.9771280000 -0.7214129 -0.268875466
721,723c726,728
< [1,] 0.0000858972 -0.09997021 -0.02038428
< [2,] -0.0048379824 -0.05650369 -0.08080706
< [3,] -0.0051891440 -0.04941831 -0.06424025
---
> [1,] 8.589724e-05 -0.09997021 -0.02038427
> [2,] -4.837982e-03 -0.05650368 -0.08080706
> [3,] -5.189144e-03 -0.04941830 -0.06424025
727c732
< [1,] -8.628394e-05 -0.08995471 -0.04365856
---
> [1,] -8.628397e-05 -0.08995471 -0.04365856
729c734
< [3,] -4.894064e-03 -0.03650256 -0.08032416
---
> [3,] -4.894064e-03 -0.03650256 -0.08032415
733,735c738,740
< [1,] -0.0002766288 -0.09831076 -0.03323767
< [2,] -0.0049510848 -0.05598596 -0.08481712
< [3,] -0.0051883571 -0.04942190 -0.06421235
---
> [1,] -0.0002766288 -0.09831076 -0.03323768
> [2,] -0.0049510848 -0.05598596 -0.08481713
> [3,] -0.0051883571 -0.04942190 -0.06421236
739,741c744,746
< [1,] 0.001981517 -0.07953230 -0.007350038
< [2,] -0.002985055 -0.03652607 -0.068066375
< [3,] -0.003198583 -0.02795678 -0.050553203
---
> [1,] 0.001981517 -0.07953230 -0.007350036
> [2,] -0.002985055 -0.03652607 -0.068066373
> [3,] -0.003198583 -0.02795678 -0.050553202
Running 'VECM.R'
Comparing 'VECM.Rout' to 'VECM.Rout.save' ...4,6c4,11
< This is mgcv 1.7-23. For overview type 'help("mgcv-package")'.
< Warning message:
< In initDefaultClusterOptions(libname) : NAs introduced by coercion
---
> This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
1687c1692
< cpiUSA 0.0210190590 -2.123157e-03 0.47585012 1.498619849 -0.047398845
---
> cpiUSA 0.0210190589 -2.123157e-03 0.47585012 1.498619849 -0.047398845
Running 'compare_tsDyn_vars.R'
Comparing 'compare_tsDyn_vars.Rout' to 'compare_tsDyn_vars.Rout.save' ...5,7c5,12
< This is mgcv 1.7-23. For overview type 'help("mgcv-package")'.
< Warning message:
< In initDefaultClusterOptions(libname) : NAs introduced by coercion
---
> This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
70c75,80
< [1] TRUE TRUE TRUE TRUE TRUE TRUE
---
> [1] "TRUE"
> [2] "Mean relative difference: 1.830196e-08"
> [3] "TRUE"
> [4] "TRUE"
> [5] "TRUE"
> [6] "Mean relative difference: 1.551162e-08"
76,77c86,87
< [5] "Mean relative difference: 0.0001434466"
< [6] "Mean relative difference: 0.001799345"
---
> [5] "Mean relative difference: 0.0001434445"
> [6] "Mean relative difference: 0.001799332"
87c97,102
< [1] TRUE TRUE TRUE TRUE TRUE TRUE
---
> [1] "TRUE"
> [2] "TRUE"
> [3] "TRUE"
> [4] "TRUE"
> [5] "Mean relative difference: 2.719027e-08"
> [6] "Mean relative difference: 1.916757e-08"
111c126
< [1] "Component 1: Mean relative difference: 4.087912e-05"
---
> [1] "Component 1: Mean relative difference: 4.087915e-05"
113,114c128,129
< [3] "Component 3: Mean relative difference: 0.0003334992"
< [4] "Component 4: Mean relative difference: 0.007030102"
---
> [3] "Component 3: Mean relative difference: 0.0003334996"
> [4] "Component 4: Mean relative difference: 0.007030107"
117,118c132,133
< [1] "Component 1: Mean relative difference: 5.373399e-05"
< [2] "Component 2: Mean relative difference: 0.0002085819"
---
> [1] "Component 1: Mean relative difference: 5.3734e-05"
> [2] "Component 2: Mean relative difference: 0.000208582"
192c207
< [4] "Mean relative difference: 0.0001395303"
---
> [4] "Mean relative difference: 0.0001395301"
195c210
< [2] "Mean relative difference: 6.786064e-07"
---
> [2] "Mean relative difference: 6.786063e-07"
197c212
< [4] "Mean relative difference: 1.354947e-07"
---
> [4] "Mean relative difference: 1.354595e-07"
202c217
< [4] "Mean relative difference: 0.016447"
---
> [4] "Mean relative difference: 0.01644698"
207c222
< [4] "Mean relative difference: 0.0173923"
---
> [4] "Mean relative difference: 0.01739229"
210c225
< [2] "Mean relative difference: 1.26139e-05"
---
> [2] "Mean relative difference: 1.261389e-05"
212c227
< [4] "Mean relative difference: 2.108827e-05"
---
> [4] "Mean relative difference: 2.108834e-05"
218c233
< [4,] "Component 4: Mean relative difference: 0.03155347"
---
> [4,] "Component 4: Mean relative difference: 0.03155348"
225c240
< [1,] "Component 1: Mean relative difference: 0.09141031"
---
> [1,] "Component 1: Mean relative difference: 0.09141032"
227,228c242,243
< [3,] "Component 3: Mean relative difference: 0.09141032"
< [4,] "Component 4: Mean relative difference: 0.09141031"
---
> [3,] "Component 3: Mean relative difference: 0.09141031"
> [4,] "Component 4: Mean relative difference: 0.09141032"
230c245
< [1,] "Component 1: Mean relative difference: 0.09141318"
---
> [1,] "Component 1: Mean relative difference: 0.09141319"
233c248
< [4,] "Component 4: Mean relative difference: 0.09112953"
---
> [4,] "Component 4: Mean relative difference: 0.09112954"
Running 'lstar.R'
Comparing 'lstar.Rout' to 'lstar.Rout.save' ...4,6c4,11
< This is mgcv 1.7-23. For overview type 'help("mgcv-package")'.
< Warning message:
< In initDefaultClusterOptions(libname) : NAs introduced by coercion
---
> This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
68c73
< const2 -1.024076 2.430066 -0.4214 0.6734492
---
> const2 -1.024076 2.430067 -0.4214 0.6734493
70,71c75,76
< phi2.2 -0.254609 0.585416 -0.4349 0.6636207
< gamma 11.153834 10.004728 1.1149 0.2649120
---
> phi2.2 -0.254609 0.585416 -0.4349 0.6636208
> gamma 11.153834 10.004737 1.1149 0.2649124
149c154
< const2 -0.672632 1.336548 -0.5033 0.6148
---
> const2 -0.672632 1.336549 -0.5033 0.6148
151,152c156,157
< gamma 100.003135 93.792099 1.0662 0.2863
< th 3.235652 0.021034 153.8283 <2e-16 ***
---
> gamma 100.003135 93.792934 1.0662 0.2863
> th 3.235652 0.021034 153.8282 <2e-16 ***
396c401
< gamma 1.0000e+02 8.0618e+01 1.2404 0.214821
---
> gamma 1.0000e+02 8.0617e+01 1.2404 0.214813
471c476
< const1 0.399240 0.283236 1.4096 0.1586673
---
> const1 0.399240 0.283183 1.4098 0.1585895
473,478c478,483
< phi1.2 -0.331696 0.097462 -3.4033 0.0006657 ***
< const2 0.782130 0.346259 2.2588 0.0238956 *
< phi2.1 0.300946 0.165911 1.8139 0.0696928 .
< phi2.2 -0.624613 0.119007 -5.2485 1.533e-07 ***
< gamma 871.923077 3818.880366 0.2283 0.8193982
< th 2.560332 0.010230 250.2826 < 2.2e-16 ***
---
> phi1.2 -0.331696 0.097428 -3.4045 0.0006628 ***
> const2 0.782130 0.346191 2.2592 0.0238681 *
> phi2.1 0.300946 0.165911 1.8139 0.0696923 .
> phi2.2 -0.624613 0.118978 -5.2498 1.523e-07 ***
> gamma 871.923077 3673.244309 0.2374 0.8123687
> th 2.560332 0.010033 255.1886 < 2.2e-16 ***
Running 'nlar-methods.R'
Comparing 'nlar-methods.Rout' to 'nlar-methods.Rout.save' ...4,6c4,11
< This is mgcv 1.7-23. For overview type 'help("mgcv-package")'.
< Warning message:
< In initDefaultClusterOptions(libname) : NAs introduced by coercion
---
> This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
Running 'regime.R'
Running 'toMlm.R'
Comparing 'toMlm.Rout' to 'toMlm.Rout.save' ...4,6c4,11
< This is mgcv 1.7-23. For overview type 'help("mgcv-package")'.
< Warning message:
< In initDefaultClusterOptions(libname) : NAs introduced by coercion
---
> This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
** running tests for arch 'x64' OK
Running '00SetarAndFriends.R'
Comparing '00SetarAndFriends.Rout' to '00SetarAndFriends.Rout.save' ...4,6c4,11
< This is mgcv 1.7-23. For overview type 'help("mgcv-package")'.
< Warning message:
< In initDefaultClusterOptions(libname) : NAs introduced by coercion
---
> This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
Running 'TVECM.sim.R'
Comparing 'TVECM.sim.Rout' to 'TVECM.sim.Rout.save' ...4,6c4,11
< This is mgcv 1.7-23. For overview type 'help("mgcv-package")'.
< Warning message:
< In initDefaultClusterOptions(libname) : NAs introduced by coercion
---
> This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
Running 'TVECM_HSTEST.R'
Comparing 'TVECM_HSTEST.Rout' to 'TVECM_HSTEST.Rout.save' ...4,6c4,11
< This is mgcv 1.7-23. For overview type 'help("mgcv-package")'.
< Warning message:
< In initDefaultClusterOptions(libname) : NAs introduced by coercion
---
> This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
Running 'VAR.R'
Comparing 'VAR.Rout' to 'VAR.Rout.save' ...4,6c4,11
< This is mgcv 1.7-23. For overview type 'help("mgcv-package")'.
< Warning message:
< In initDefaultClusterOptions(libname) : NAs introduced by coercion
---
> This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
Running 'VECM.R'
Comparing 'VECM.Rout' to 'VECM.Rout.save' ...4,6c4,11
< This is mgcv 1.7-23. For overview type 'help("mgcv-package")'.
< Warning message:
< In initDefaultClusterOptions(libname) : NAs introduced by coercion
---
> This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
Running 'compare_tsDyn_vars.R'
Comparing 'compare_tsDyn_vars.Rout' to 'compare_tsDyn_vars.Rout.save' ...5,7c5,12
< This is mgcv 1.7-23. For overview type 'help("mgcv-package")'.
< Warning message:
< In initDefaultClusterOptions(libname) : NAs introduced by coercion
---
> This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
Running 'lstar.R'
Comparing 'lstar.Rout' to 'lstar.Rout.save' ...4,6c4,11
< This is mgcv 1.7-23. For overview type 'help("mgcv-package")'.
< Warning message:
< In initDefaultClusterOptions(libname) : NAs introduced by coercion
---
> This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
68c73
< const2 -1.024076 2.430067 -0.4214 0.6734494
---
> const2 -1.024076 2.430067 -0.4214 0.6734493
71c76
< gamma 11.153834 10.004741 1.1149 0.2649126
---
> gamma 11.153834 10.004737 1.1149 0.2649124
149c154
< const2 -0.672632 1.336550 -0.5033 0.6148
---
> const2 -0.672632 1.336549 -0.5033 0.6148
151,152c156,157
< gamma 100.003135 93.794598 1.0662 0.2863
< th 3.235652 0.021034 153.8281 <2e-16 ***
---
> gamma 100.003135 93.792934 1.0662 0.2863
> th 3.235652 0.021034 153.8282 <2e-16 ***
396c401
< gamma 1.0000e+02 8.0618e+01 1.2404 0.214821
---
> gamma 1.0000e+02 8.0617e+01 1.2404 0.214813
471,478c476,483
< const1 3.9924e-01 2.8316e-01 1.4099 0.1585548
< phi1.1 1.2466e+00 1.4403e-01 8.6553 < 2.2e-16 ***
< phi1.2 -3.3170e-01 9.7413e-02 -3.4050 0.0006616 ***
< const2 7.8213e-01 3.4616e-01 2.2594 0.0238558 *
< phi2.1 3.0095e-01 1.6591e-01 1.8139 0.0696920 .
< phi2.2 -6.2461e-01 1.1897e-01 -5.2504 1.518e-07 ***
< gamma 8.7192e+02 3.6064e+03 0.2418 0.8089581
< th 2.5603e+00 9.9442e-03 257.4712 < 2.2e-16 ***
---
> const1 0.399240 0.283183 1.4098 0.1585895
> phi1.1 1.246637 0.144031 8.6553 < 2.2e-16 ***
> phi1.2 -0.331696 0.097428 -3.4045 0.0006628 ***
> const2 0.782130 0.346191 2.2592 0.0238681 *
> phi2.1 0.300946 0.165911 1.8139 0.0696923 .
> phi2.2 -0.624613 0.118978 -5.2498 1.523e-07 ***
> gamma 871.923077 3673.244309 0.2374 0.8123687
> th 2.560332 0.010033 255.1886 < 2.2e-16 ***
Running 'nlar-methods.R'
Comparing 'nlar-methods.Rout' to 'nlar-methods.Rout.save' ...4,6c4,11
< This is mgcv 1.7-23. For overview type 'help("mgcv-package")'.
< Warning message:
< In initDefaultClusterOptions(libname) : NAs introduced by coercion
---
> This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
Running 'regime.R'
Running 'toMlm.R'
Comparing 'toMlm.Rout' to 'toMlm.Rout.save' ...4,6c4,11
< This is mgcv 1.7-23. For overview type 'help("mgcv-package")'.
< Warning message:
< In initDefaultClusterOptions(libname) : NAs introduced by coercion
---
> This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
>
> Attaching package: 'Matrix'
>
> The following object(s) are masked from 'package:stats':
>
> toeplitz
>
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes in 'inst/doc' ... OK
- checking running R code from vignettes ... OK
- checking re-building of vignette PDFs ... OK
- checking PDF version of manual ... OK