• using R version 2.14.2 (2012-02-29)
  • using platform: i386-pc-mingw32 (32-bit)
  • using session charset: ISO8859-1
  • checking for file 'robustbase/DESCRIPTION' ... OK
  • this is package 'robustbase' version '0.9-1'
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking whether package 'robustbase' can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • loading checks for arch 'i386'
    ** checking whether the package can be loaded ... OK
    ** checking whether the package can be loaded with stated dependencies ... OK
    ** checking whether the package can be unloaded cleanly ... OK
    ** checking whether the namespace can be loaded with stated dependencies ... OK
    ** checking whether the namespace can be unloaded cleanly ... OK
  • loading checks for arch 'x64'
    ** checking whether the package can be loaded ... OK
    ** checking whether the package can be loaded with stated dependencies ... OK
    ** checking whether the package can be unloaded cleanly ... OK
    ** checking whether the namespace can be loaded with stated dependencies ... OK
    ** checking whether the namespace can be unloaded cleanly ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    .vcov.w: no visible binding for global variable 'r'
    glmrobMqle: no visible binding for global variable 'residP'
    glmrobMqle: no visible binding for global variable 'residPS'
    glmrobMqle: no visible binding for global variable 'dmu.deta'
    lmrob.ggw.ac: no visible binding for global variable 'r'
    lmrob.ggw.bp: no visible binding for global variable 'r'
    lmrob.kappa : fun.min: no visible global function definition for 'psi'
    lmrob.kappa : fun.min: no visible binding for global variable 'r'
    lmrob.kappa : fun.min: no visible global function definition for 'wgt'
    lmrob.tau.fast.coefs: no visible binding for global variable 'r'
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of 'data' directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking line endings in Makefiles ... OK
  • checking for portable compilation flags in Makevars ... OK
  • checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
  • checking compiled code ... OK
  • checking sizes of PDF files under 'inst/doc' ... OK
  • checking examples ...
    ** running examples for arch 'i386' ... OK
    ** running examples for arch 'x64' ... OK
  • checking for unstated dependencies in tests ... OK
  • checking tests ...
    ** running tests for arch 'i386' OK
    Running 'LTS-specials.R'
    Running 'MCD-specials.R'
    Comparing 'MCD-specials.Rout' to 'MCD-specials.Rout.save' ... OK
    Running 'OGK-ex.R'
    Comparing 'OGK-ex.Rout' to 'OGK-ex.Rout.save' ... OK
    Running 'binom-ni-small.R'
    Comparing 'binom-ni-small.Rout' to 'binom-ni-small.Rout.save' ... OK
    Running 'binom-no-x.R'
    Running 'exact-fit-categorical.R'
    Running 'glmrob-1.R'
    Running 'glmrob-specials.R'
    Running 'huber-etc.R'
    Comparing 'huber-etc.Rout' to 'huber-etc.Rout.save' ... OK
    Running 'lmrob-data.R'
    Comparing 'lmrob-data.Rout' to 'lmrob-data.Rout.save' ... OK
    Running 'lmrob-ex12.R'
    Running 'lmrob-methods.R'
    Comparing 'lmrob-methods.Rout' to 'lmrob-methods.Rout.save' ... OK
    Running 'lmrob-psifns.R'
    Comparing 'lmrob-psifns.Rout' to 'lmrob-psifns.Rout.save' ...428c428
    < S refinements did not converge (to tol=1e-007) in 200 iterations
    ---
    > S refinements did not converge (to tol=1e-07) in 200 iterations
    Running 'm-s-estimator.R'
    Comparing 'm-s-estimator.Rout' to 'm-s-estimator.Rout.save' ...113,117c113,117
    < Min. :-396.71 Min. :-39.00 Min. :-35.8703 Min. :16.30
    < 1st Qu.:-223.37 1st Qu.:-23.55 1st Qu.: -8.9603 1st Qu.:30.17
    < Median :-161.10 Median :-21.28 Median : -7.2929 Median :32.52
    < Mean :-160.82 Mean :-22.03 Mean : -7.8790 Mean :32.32
    < 3rd Qu.:-103.36 3rd Qu.:-18.42 3rd Qu.: -5.9652 3rd Qu.:36.16
    ---
    > Min. :-316.24 Min. :-33.92 Min. :-35.8704 Min. :16.43
    > 1st Qu.:-225.08 1st Qu.:-23.56 1st Qu.: -8.9603 1st Qu.:29.92
    > Median :-165.13 Median :-21.67 Median : -7.1102 Median :32.20
    > Mean :-162.74 Mean :-22.07 Mean : -8.1134 Mean :32.12
    > 3rd Qu.:-103.36 3rd Qu.:-18.47 3rd Qu.: -5.9652 3rd Qu.:35.72
    120,125c120,125
    < Min. :-0.038082 Min. :0.01744 Min. :0.2752 Min. :29.79
    < 1st Qu.:-0.005917 1st Qu.:0.03960 1st Qu.:0.4956 1st Qu.:30.42
    < Median : 0.021791 Median :0.04717 Median :0.6381 Median :31.00
    < Mean : 0.026859 Mean :0.04611 Mean :0.6227 Mean :30.95
    < 3rd Qu.: 0.055614 3rd Qu.:0.05211 3rd Qu.:0.7389 3rd Qu.:31.35
    < Max. : 0.103367 Max. :0.06765 Max. :1.1121 Max. :32.06
    ---
    > Min. :-0.03808 Min. :0.02111 Min. :0.2555 Min. :29.79
    > 1st Qu.:-0.00397 1st Qu.:0.03927 1st Qu.:0.4956 1st Qu.:30.42
    > Median : 0.02142 Median :0.04717 Median :0.6404 Median :30.91
    > Mean : 0.02678 Mean :0.04621 Mean :0.6275 Mean :30.94
    > 3rd Qu.: 0.05561 3rd Qu.:0.05211 3rd Qu.:0.7506 3rd Qu.:31.36
    > Max. : 0.10427 Max. :0.06938 Max. :0.9172 Max. :32.18
    272,277c272,277
    < Min. :-396.7 Min. :-39.00 Min. :-36.478 Min. :16.30
    < 1st Qu.:-222.4 1st Qu.:-23.02 1st Qu.: -8.956 1st Qu.:27.96
    < Median :-159.9 Median :-20.05 Median : -7.791 Median :30.52
    < Mean :-157.3 Mean :-20.34 Mean : -8.832 Mean :30.83
    < 3rd Qu.:-102.3 3rd Qu.:-17.04 3rd Qu.: -6.842 3rd Qu.:32.75
    < Max. : 101.1 Max. :-12.06 Max. : -4.032 Max. :42.23
    ---
    > Min. :-316.3 Min. :-30.56 Min. :-36.501 Min. :16.43
    > 1st Qu.:-224.2 1st Qu.:-23.09 1st Qu.: -8.956 1st Qu.:28.05
    > Median :-160.7 Median :-20.72 Median : -7.693 Median :31.21
    > Mean :-159.9 Mean :-20.52 Mean : -8.873 Mean :31.03
    > 3rd Qu.:-102.7 3rd Qu.:-17.40 3rd Qu.: -6.819 3rd Qu.:33.04
    > Max. : 101.7 Max. :-12.06 Max. : -4.032 Max. :42.23
    279,284c279,284
    < Min. :-0.02141 Min. :0.01464 Min. :0.2043 Min. :29.79
    < 1st Qu.: 0.02103 1st Qu.:0.03865 1st Qu.:0.4956 1st Qu.:30.31
    < Median : 0.04639 Median :0.04182 Median :0.6356 Median :30.57
    < Mean : 0.04123 Mean :0.04340 Mean :0.6224 Mean :30.72
    < 3rd Qu.: 0.06115 3rd Qu.:0.04795 3rd Qu.:0.7295 3rd Qu.:31.04
    < Max. : 0.09102 Max. :0.06476 Max. :1.1121 Max. :32.01
    ---
    > Min. :-0.02141 Min. :0.01459 Min. :0.2034 Min. :29.79
    > 1st Qu.: 0.02071 1st Qu.:0.03924 1st Qu.:0.5007 1st Qu.:30.37
    > Median : 0.03911 Median :0.04493 Median :0.6381 Median :30.57
    > Mean : 0.03852 Mean :0.04372 Mean :0.6310 Mean :30.70
    > 3rd Qu.: 0.06021 3rd Qu.:0.04811 3rd Qu.:0.7508 3rd Qu.:30.96
    > Max. : 0.09102 Max. :0.06367 Max. :0.9172 Max. :31.84
    299,301c299,301
    < Step 338: new candidate with sc = 31.34552
    < Finished M-S subsampling with scale = 31.34552
    < b1: -5.445072 7.825257 0.178215 7.656800
    ---
    > Step 338: new candidate with sc = 31.51188
    > Finished M-S subsampling with scale = 31.51188
    > b1: -5.445072 7.825257 1.756708 7.656800
    304,305c304,307
    < Refinement step 6: better fit, scale: 31.34273
    < Refinement step 7: better fit, scale: 31.33741
    ---
    > Refinement step 1: better fit, scale: 31.48594
    > Refinement step 4: better fit, scale: 31.38752
    > Refinement step 5: better fit, scale: 31.34287
    > Refinement step 6: better fit, scale: 31.32908
    307,308c309,310
    < b1: -111.930390 -14.841307 -9.456777 27.431135
    < b2: 0.067235 0.036026 0.536591
    ---
    > b1: -113.528805 -14.858187 -9.426368 27.485299
    > b2: 0.066846 0.036134 0.540701
    Running 'mc-etc.R'
    Comparing 'mc-etc.Rout' to 'mc-etc.Rout.save' ...35c35
    < --> mc(rlnorm(4)) = -0.000000
    ---
    > --> mc(rlnorm(4)) = 0.000000
    Running 'mc-strict.R'
    Running 'nlrob-tst.R'
    Running 'plot-ex.R'
    Running 'poisson-ex.R'
    Running 'psi-rho-etc.R'
    Comparing 'psi-rho-etc.Rout' to 'psi-rho-etc.Rout.save' ... OK
    Running 'small-sample.R'
    Comparing 'small-sample.Rout' to 'small-sample.Rout.save' ... OK
    Running 'subsample.R'
    Running 'tlts.R'
    Comparing 'tlts.Rout' to 'tlts.Rout.save' ... OK
    Running 'tmcd.R'
    Comparing 'tmcd.Rout' to 'tmcd.Rout.save' ...887c887
    < system is computationally singular: reciprocal condition number = 4.85293e-011
    ---
    > system is computationally singular: reciprocal condition number = 4.85293e-11
    Running 'wgt-himed-xtra.R'
    Running 'wgt-himed.R'
    Comparing 'wgt-himed.Rout' to 'wgt-himed.Rout.save' ... OK
    ** running tests for arch 'x64' OK
    Running 'LTS-specials.R'
    Running 'MCD-specials.R'
    Comparing 'MCD-specials.Rout' to 'MCD-specials.Rout.save' ... OK
    Running 'OGK-ex.R'
    Comparing 'OGK-ex.Rout' to 'OGK-ex.Rout.save' ... OK
    Running 'binom-ni-small.R'
    Comparing 'binom-ni-small.Rout' to 'binom-ni-small.Rout.save' ... OK
    Running 'binom-no-x.R'
    Running 'exact-fit-categorical.R'
    Running 'glmrob-1.R'
    Running 'glmrob-specials.R'
    Running 'huber-etc.R'
    Comparing 'huber-etc.Rout' to 'huber-etc.Rout.save' ... OK
    Running 'lmrob-data.R'
    Comparing 'lmrob-data.Rout' to 'lmrob-data.Rout.save' ... OK
    Running 'lmrob-ex12.R'
    Running 'lmrob-methods.R'
    Comparing 'lmrob-methods.Rout' to 'lmrob-methods.Rout.save' ... OK
    Running 'lmrob-psifns.R'
    Comparing 'lmrob-psifns.Rout' to 'lmrob-psifns.Rout.save' ...428c428
    < S refinements did not converge (to tol=1e-007) in 200 iterations
    ---
    > S refinements did not converge (to tol=1e-07) in 200 iterations
    Running 'm-s-estimator.R'
    Comparing 'm-s-estimator.Rout' to 'm-s-estimator.Rout.save' ...113c113
    < Min. :-316.24 Min. :-33.92 Min. :-35.8703 Min. :16.43
    ---
    > Min. :-316.24 Min. :-33.92 Min. :-35.8704 Min. :16.43
    Running 'mc-etc.R'
    Comparing 'mc-etc.Rout' to 'mc-etc.Rout.save' ... OK
    Running 'mc-strict.R'
    Running 'nlrob-tst.R'
    Running 'plot-ex.R'
    Running 'poisson-ex.R'
    Running 'psi-rho-etc.R'
    Comparing 'psi-rho-etc.Rout' to 'psi-rho-etc.Rout.save' ... OK
    Running 'small-sample.R'
    Comparing 'small-sample.Rout' to 'small-sample.Rout.save' ... OK
    Running 'subsample.R'
    Running 'tlts.R'
    Comparing 'tlts.Rout' to 'tlts.Rout.save' ... OK
    Running 'tmcd.R'
    Comparing 'tmcd.Rout' to 'tmcd.Rout.save' ...887c887
    < system is computationally singular: reciprocal condition number = 4.85293e-011
    ---
    > system is computationally singular: reciprocal condition number = 4.85293e-11
    Running 'wgt-himed-xtra.R'
    Running 'wgt-himed.R'
    Comparing 'wgt-himed.Rout' to 'wgt-himed.Rout.save' ... OK
  • checking for unstated dependencies in vignettes ... OK
  • checking package vignettes in 'inst/doc' ... OK
  • checking running R code from vignettes ... OK
  • checking re-building of vignette PDFs ... OK
  • checking PDF version of manual ... OK