• using R version 2.14.2 (2012-02-29)
  • using platform: i386-pc-mingw32 (32-bit)
  • using session charset: ISO8859-1
  • checking for file 'rda/DESCRIPTION' ... OK
  • this is package 'rda' version '1.0.2'
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking whether package 'rda' can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... OK
  • checking Rd files ... NOTE
    prepare_Rd: rda.Rd:107: Dropping empty section \keyword
    prepare_Rd: rda.cv.Rd:100: Dropping empty section \keyword
    prepare_Rd: rda.genelist.Rd:55: Dropping empty section \keyword
    prepare_Rd: rda.plotcv.Rd:61: Dropping empty section \keyword
    prepare_Rd: rda.predict.Rd:97: Dropping empty section \keyword
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... NOTE
    S3 methods shown with full name in documentation object 'plot.rdacv':
    'plot.rdacv'

    S3 methods shown with full name in documentation object 'predict.rda':
    'predict.rda'

    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See the chapter 'Writing R documentation files' in the 'Writing R
    Extensions' manual.
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of 'data' directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... WARNING
    Warning: large data file(s) saved inefficiently:
    size ASCII compress
    brain.rda 1.8Mb FALSE none
    colon.rda 969Kb FALSE none

    Note: significantly better compression could be obtained
    by using R CMD build --resave-data
    old_size new_size compress
    brain.rda 1.8Mb 695Kb xz
  • checking examples ... OK
  • checking PDF version of manual ... OK
    WARNING: There was 1 warning, see
    'd:/Rcompile/CRANpkg/local/2.14/rda.Rcheck/00check.log'
    for details