- using R version 2.15.3 (2013-03-01)
- using platform: i386-w64-mingw32 (32-bit)
- using session charset: ISO8859-1
- checking for file 'fpc/DESCRIPTION' ... OK
- this is package 'fpc' version '2.1-5'
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking whether package 'fpc' can be installed ... OK
- checking installed package size ... OK
- checking package directory ... OK
- checking for portable file names ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
- loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of 'data' directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ...
** running examples for arch 'i386' ... OK
** checking differences from 'fpc-Ex_i386.Rout' to 'fpc-Ex.Rout.save' ...
2c2
< Package 'mclust' version 4.1
---
> Package 'mclust' version 4.0
274,276d273
<
< detaching 'package:mvtnorm'
<
562,564d558
<
< detaching 'package:mvtnorm'
<
944,946c938,940
< [1,] 0.84359426 1.14608710 -0.02209846
< [2,] -0.33649001 0.27903245 -0.01187219
< [3,] -0.06808816 0.03965075 1.00303099
---
> [1,] 0.84359426 -1.14608710 0.02209846
> [2,] -0.33649001 -0.27903245 0.01187219
> [3,] -0.06808816 -0.03965075 -1.00303099
949,951c943,945
< [1,] -0.07433352 -1.420772600 0.039179197
< [2,] -0.43725296 -0.002745807 -0.005281343
< [3,] -0.03831248 -0.001676168 -1.005389819
---
> [1,] -0.07433352 1.420772600 0.039179197
> [2,] -0.43725296 0.002745807 -0.005281343
> [3,] -0.03831248 0.001676168 -1.005389819
1041,1043d1034
<
< detaching 'package:mvtnorm'
<
1133,1136c1124,1127
< Sepal.Length 0.4364358 0.2255444 0.86784904 7.410527e-02
< Sepal.Width 0.6546537 0.5833044 -0.48081650 1.089355e-05
< Petal.Length -0.4364358 0.5910818 0.12283086 -6.671272e-01
< Petal.Width -0.4364358 0.5094192 0.02379343 7.412488e-01
---
> Sepal.Length 0.4364358 0.2255444 0.86784913 7.410413e-02
> Sepal.Width 0.6546537 0.5833044 -0.48081650 1.152417e-05
> Petal.Length -0.4364358 0.5910818 0.12282998 -6.671273e-01
> Petal.Width -0.4364358 0.5094192 0.02379441 7.412487e-01
1157,1160c1148,1151
< Sepal.Length 0.78842369 -0.1589992 -0.5613449 -0.1949340
< Sepal.Width 0.60787954 0.3492963 0.6736139 0.2339208
< Petal.Length 0.04212018 -0.4129676 0.4505895 -0.7903498
< Petal.Width 0.08424036 -0.8259353 0.1676467 0.5316287
---
> Sepal.Length 0.78842369 -0.1589992 -0.5596188 -0.1998354
> Sepal.Width 0.60787954 0.3492963 0.6715425 0.2398025
> Petal.Length 0.04212018 -0.4129676 0.4574837 -0.7863792
> Petal.Width 0.08424036 -0.8259353 0.1629913 0.5330744
1173,1176c1164,1167
< Sepal.Length 0.07550285 0.6328310 -0.7566467 0.1459795
< Sepal.Width -0.17216644 0.4934753 0.2375780 -0.8187781
< Petal.Length -0.74300787 -0.4180672 -0.4684942 -0.2316729
< Petal.Width -0.64233740 0.4257075 0.3893015 0.5045989
---
> Sepal.Length 0.07550285 0.6328310 0.67278171 0.37575125
> Sepal.Width -0.17216644 0.4934753 0.03098703 -0.85198630
> Petal.Length -0.74300787 -0.4180672 0.51749754 -0.07318086
> Petal.Width -0.64233740 0.4257075 -0.52782655 0.35717629
1189,1192c1180,1183
< Sepal.Length 0.7730041 -0.09914374 0.61019654 -0.14246152
< Sepal.Width 0.4418583 0.79204432 -0.41671437 0.06145080
< Petal.Length -0.4416270 0.59416223 0.66969661 0.05867979
< Petal.Width -0.1104150 0.09903318 -0.07426816 -0.98614664
---
> Sepal.Length 0.7730041 -0.09914374 0.62452138 -0.0510699878
> Sepal.Width 0.4418583 0.79204432 -0.42122054 -0.0005715947
> Petal.Length -0.4416270 0.59416223 0.65375908 0.1566395315
> Petal.Width -0.1104150 0.09903318 0.07173123 -0.9863344193
1516,1518d1506
<
< detaching 'package:mvtnorm'
<
2104,2106d2091
<
< detaching 'package:mvtnorm'
<
2395,2398c2380,2383
< [1,] 0.069320616 0.0518644883 0.0046873868 0.0095366850
< [2,] 0.051864488 0.0431650668 0.0004939104 0.0007935271
< [3,] 0.004687387 0.0004939104 0.0032572771 0.0062259484
< [4,] 0.009536685 0.0007935271 0.0062259484 0.0124828618
---
> [1,] 0.069319855 0.0518654013 0.0046861756 0.0095378232
> [2,] 0.051865401 0.0431639712 0.0004953638 0.0007921612
> [3,] 0.004686176 0.0004953638 0.0032597388 0.0062255655
> [4,] 0.009537823 0.0007921612 0.0062255655 0.0124822565
2411,2414c2396,2399
< [1,] 0.007749167 0.003807059 -0.01056156 -0.000890472
< [2,] 0.003807059 0.007520730 0.01058065 0.015831108
< [3,] -0.010561560 0.010580649 0.06414171 0.049636441
< [4,] -0.000890472 0.015831108 0.04963644 0.048814211
---
> [1,] 0.0077020291 0.003885942 -0.01056405 -0.0009142804
> [2,] 0.0038859417 0.007498913 0.01063072 0.0157883091
> [3,] -0.0105640457 0.010630720 0.06416071 0.0496007520
> [4,] -0.0009142804 0.015788309 0.04960075 0.0488641667
2427,2430c2412,2415
< [1,] 0.066419771 0.036305431 -0.038563657 -0.009616087
< [2,] 0.036305431 0.032396421 -0.013663871 -0.004044032
< [3,] -0.038563657 -0.013663871 0.027814107 0.006369898
< [4,] -0.009616087 -0.004044032 0.006369898 0.001595522
---
> [1,] 0.066426726 0.036301977 -0.038563799 -0.009580652
> [2,] 0.036301977 0.032397906 -0.013662418 -0.004068082
> [3,] -0.038563799 -0.013662418 0.027805813 0.006407895
> [4,] -0.009580652 -0.004068082 0.006407895 0.001595376
2435,2454c2420,2439
< 122 1.000000e+00 0.000000e+00 0.0000000 0.00000e+00 0 0.000000e+00
< 42 1.000000e+00 1.000000e+00 0.0000000 0.00000e+00 0 0.000000e+00
< 45 7.431477e-78 7.431477e-78 1.0000000 0.00000e+00 0 0.000000e+00
< 86 1.000000e+00 0.000000e+00 0.0000000 7.61652e-267 0 0.000000e+00
< 70 1.074570e-19 0.000000e+00 0.0000000 1.00000e+00 0 0.000000e+00
< 137 4.300906e-134 0.000000e+00 0.0000000 0.00000e+00 1 0.000000e+00
< 37 9.430013e-103 9.430013e-103 1.0000000 0.00000e+00 0 0.000000e+00
< 46 1.000000e+00 1.000000e+00 0.0000000 0.00000e+00 0 0.000000e+00
< 134 0.000000e+00 0.000000e+00 0.0000000 0.00000e+00 0 0.000000e+00
< 88 0.000000e+00 0.000000e+00 0.0000000 0.00000e+00 0 1.000000e+00
< 72 2.877478e-90 0.000000e+00 0.0000000 1.00000e+00 0 0.000000e+00
< 123 0.000000e+00 0.000000e+00 0.0000000 0.00000e+00 0 0.000000e+00
< 1 8.836887e-28 8.836887e-28 1.0000000 0.00000e+00 0 0.000000e+00
< 147 1.424320e-288 0.000000e+00 0.0000000 0.00000e+00 0 1.000000e+00
< 51 0.000000e+00 0.000000e+00 0.0000000 0.00000e+00 0 0.000000e+00
< 120 0.000000e+00 0.000000e+00 0.0000000 0.00000e+00 0 9.998512e-01
< 9 1.000000e+00 1.000000e+00 0.0000000 0.00000e+00 0 0.000000e+00
< 18 3.526927e-03 3.526927e-03 0.9964731 0.00000e+00 0 0.000000e+00
< 28 8.360527e-61 8.360527e-61 1.0000000 0.00000e+00 0 0.000000e+00
< 54 2.602855e-34 0.000000e+00 0.0000000 1.00000e+00 0 1.825211e-292
---
> 122 1.000000e+00 0.000000e+00 0.0000000 0.000000e+00 0 0.0000000
> 42 1.000000e+00 1.000000e+00 0.0000000 0.000000e+00 0 0.0000000
> 45 7.431477e-78 7.431477e-78 1.0000000 0.000000e+00 0 0.0000000
> 86 1.000000e+00 0.000000e+00 0.0000000 1.027899e-264 0 0.0000000
> 70 1.074570e-19 0.000000e+00 0.0000000 1.000000e+00 0 0.0000000
> 137 4.297997e-134 0.000000e+00 0.0000000 0.000000e+00 1 0.0000000
> 37 9.430013e-103 9.430013e-103 1.0000000 0.000000e+00 0 0.0000000
> 46 1.000000e+00 1.000000e+00 0.0000000 0.000000e+00 0 0.0000000
> 134 0.000000e+00 0.000000e+00 0.0000000 0.000000e+00 0 0.0000000
> 88 0.000000e+00 0.000000e+00 0.0000000 0.000000e+00 0 1.0000000
> 72 2.878919e-90 0.000000e+00 0.0000000 1.000000e+00 0 0.0000000
> 123 0.000000e+00 0.000000e+00 0.0000000 0.000000e+00 0 0.0000000
> 1 8.836887e-28 8.836887e-28 1.0000000 0.000000e+00 0 0.0000000
> 147 1.422993e-288 0.000000e+00 0.0000000 0.000000e+00 0 1.0000000
> 51 0.000000e+00 0.000000e+00 0.0000000 0.000000e+00 0 0.0000000
> 120 0.000000e+00 0.000000e+00 0.0000000 0.000000e+00 0 0.9998512
> 9 1.000000e+00 1.000000e+00 0.0000000 0.000000e+00 0 0.0000000
> 18 3.526927e-03 3.526927e-03 0.9964731 0.000000e+00 0 0.0000000
> 28 8.360527e-61 8.360527e-61 1.0000000 0.000000e+00 0 0.0000000
> 54 2.602925e-34 0.000000e+00 0.0000000 1.000000e+00 0 0.0000000
2465c2450
< 88 0.000000e+00 4.082830e-80
---
> 88 0.000000e+00 7.026138e-62
2520c2505
< 93.1465719 138.3375499 119.1334177 117.5885785 168.8774326 150.4594812
---
> 93.1465719 138.3375500 119.1334177 117.5885785 168.8774326 150.4594812
2529,2531d2513
<
< detaching 'package:mvtnorm'
<
2551,2553d2532
<
< detaching 'package:mvtnorm'
<
2683,2685d2661
<
< detaching 'package:mvtnorm'
<
2703,2705d2678
<
< detaching 'package:mvtnorm'
<
2939c2912
< detaching 'package:mvtnorm', 'package:prabclus'
---
> detaching 'package:prabclus'
OK
** running examples for arch 'x64' ... OK
** checking differences from 'fpc-Ex_x64.Rout' to 'fpc-Ex.Rout.save' ...
2c2
< Package 'mclust' version 4.1
---
> Package 'mclust' version 4.0
274,276d273
<
< detaching 'package:mvtnorm'
<
562,564d558
<
< detaching 'package:mvtnorm'
<
1041,1043d1034
<
< detaching 'package:mvtnorm'
<
1516,1518d1506
<
< detaching 'package:mvtnorm'
<
2104,2106d2091
<
< detaching 'package:mvtnorm'
<
2529,2531d2513
<
< detaching 'package:mvtnorm'
<
2551,2553d2532
<
< detaching 'package:mvtnorm'
<
2683,2685d2661
<
< detaching 'package:mvtnorm'
<
2703,2705d2678
<
< detaching 'package:mvtnorm'
<
2939c2912
< detaching 'package:mvtnorm', 'package:prabclus'
---
> detaching 'package:prabclus'
OK
- checking for unstated dependencies in tests ... OK
- checking tests ...
** running tests for arch 'i386' OK
Running 'fpctests.R'
Comparing 'fpctests.Rout' to 'fpctests.Rout.save' ...6c6
< Package 'mclust' version 4.1
---
> Package 'mclust' version 4.0
611,613d610
< Top 3 models based on the BIC criterion:
< VVV,4 VVV,3 VVV,2
< -453.6662 -457.6362 -473.0819
685,687d681
< Top 3 models based on the BIC criterion:
< EEE,5
< -439.4828
883c877
< The following object(s) are masked from 'package:flexmix':
---
> The following object(s) are masked from 'package:modeltools':
1137c1131
< [2,] 7 0.30693069
---
> [2,] 7 0.35643564
** running tests for arch 'x64' OK
Running 'fpctests.R'
Comparing 'fpctests.Rout' to 'fpctests.Rout.save' ...6c6
< Package 'mclust' version 4.1
---
> Package 'mclust' version 4.0
611,613d610
< Top 3 models based on the BIC criterion:
< VVV,4 VVV,3 VVV,2
< -453.6662 -457.6362 -473.0819
685,687d681
< Top 3 models based on the BIC criterion:
< EEE,5
< -439.4828
883c877
< The following object(s) are masked from 'package:flexmix':
---
> The following object(s) are masked from 'package:modeltools':
1112,1113c1106,1107
< [1,] 8 0.13861386
< [2,] 7 0.68316832
---
> [1,] 8 0.17821782
> [2,] 7 0.65346535
- checking PDF version of manual ... OK