• using R version 2.14.2 (2012-02-29)
• using platform: i386-pc-mingw32 (32-bit)
• using session charset: ISO8859-1
• checking for file 'PBSmodelling/DESCRIPTION' ... OK
• this is package 'PBSmodelling' version '2.63.229'
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking whether package 'PBSmodelling' can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• loading checks for arch 'i386'
  ** checking whether the package can be loaded ... OK
  ** checking whether the package can be loaded with stated dependencies ... OK
  ** checking whether the package can be unloaded cleanly ... OK
  ** checking whether the namespace can be loaded with stated dependencies ... OK
  ** checking whether the namespace can be unloaded cleanly ... OK
• loading checks for arch 'x64'
  ** checking whether the package can be loaded ... OK
  ** checking whether the package can be loaded with stated dependencies ... OK
  ** checking whether the package can be unloaded cleanly ... OK
  ** checking whether the namespace can be loaded with stated dependencies ... OK
  ** checking whether the namespace can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  File 'PBSmodelling/R/zzz.r':
  .onLoad calls:
  cat("\nPBS Modelling", pkg_info$Version, "-- Copyright (C) 2005-2010 Fisheries and Oceans Canada\n\nA complete user guide 'PBSmodelling-UG.pdf' is located at \n", userguide_path, "\n\nPackaged on", pkg_date, "\nPacific Biological Station, Nanaimo\n\n")
  cat("-------------------------------------------------------------\n")
  cat("ERROR: PBS Modelling requires the tcl package \"BWidget\"\nand cannot proceed until it is installed.\n")
  cat("Ubuntu (apt) users can install via the command:\n\tsudo apt-get install bwidget\n")
  cat("Bwidget source can be downloaded from http://sourceforge.net/projects/tcllib/files/\n\n")
  cat("ERROR: PBS Modelling requires the tcl package \"Tktable\"\nand cannot proceed until it is installed.\n")
  cat("Ubuntu (apt) users can install via the command:\n\tsudo apt-get install libtktable2.9\n")
  cat("Mac (port) users can install via the command:\n\tsudo port install tktable (assuming mac ports is installed)\n")
  cat("tktable can also be donwloaded from http://sourceforge.net/projects/tktable/files/\n\n")
  cat("-------------------------------------------------------------\n")
  
  Package startup functions should use 'packageStartupMessage' to
  generate messages.
  See section 'Good practice' in ?.onAttach.
  
  .createWidget.slideplus : saveSlideBounds: no visible binding for
  global variable 'minVal'
  .createWidget.slideplus : saveSlideBounds: no visible binding for
  global variable 'curVal'
  .createWidget.slideplus : saveSlideBounds: no visible binding for
  global variable 'maxVal'
  .dClose: no visible binding for global variable '.dwd'
  .dClose: no visible binding for global variable '.dls'
  .getPrefix: no visible binding for global variable 'prefix'
  .loadCRunComparison: no visible binding for global variable 'runs'
  .sortHelperActive: no visible binding for global variable 'PBS.history'
  .sortHelperActive: no visible binding for '<<-' assignment to
  'tmp.before'
  .sortWidget : .done_sorting: no visible binding for global variable
  'PBS.history'
  .sortWidget : .done_sorting: no visible binding for '<<-' assignment to
  'PBS.history'
  .updateHistory: no visible binding for global variable 'PBS.history'
  .updateHistoryButtons: no visible binding for global variable
  'PBS.history'
  .viewPkgDemo: no visible binding for global variable 'OK'
  addHistory: no visible binding for global variable 'PBS.history'
  addHistory: no visible binding for '<<-' assignment to 'PBS.history'
  backHistory: no visible binding for global variable 'PBS.history'
  backHistory: no visible binding for '<<-' assignment to 'PBS.history'
  calcMin : Sfun: no visible binding for '<<-' assignment to 'PBSmin'
  calcMin : Sfun: no visible binding for global variable 'PBSmin'
  calcMin: no visible binding for '<<-' assignment to 'PBSmin'
  calcMin: no visible binding for global variable 'PBSmin'
  clearHistory: no visible binding for global variable 'PBS.history'
  clearHistory: no visible binding for '<<-' assignment to 'PBS.history'
  createWin: no visible binding for global variable 'PBS.history'
  createWin: no visible binding for '<<-' assignment to 'PBS.history'
  createWin : .createMetaWidget.menu: no visible binding for global
  variable 'command'
  exportHistory: no visible binding for global variable 'PBS.history'
  firstHistory: no visible binding for global variable 'PBS.history'
  forwHistory: no visible binding for global variable 'PBS.history'
  forwHistory: no visible binding for '<<-' assignment to 'PBS.history'
  getChoice: no visible binding for global variable 'blist'
  importHistory: no visible binding for global variable 'PBS.history'
  importHistory: no visible binding for '<<-' assignment to 'PBS.history'
  jumpHistory: no visible binding for global variable 'PBS.history'
  jumpHistory: no visible binding for '<<-' assignment to 'PBS.history'
  lastHistory: no visible binding for global variable 'PBS.history'
  rmHistory: no visible binding for global variable 'PBS.history'
  rmHistory: no visible binding for '<<-' assignment to 'PBS.history'
  runDemos: no visible binding for global variable 'OK'
  runExample : .runExHelperQuit: no visible binding for global variable
  '.cwd'
  runExample : .runExHelperQuit: no visible binding for global variable
  '.cls'
  runExamples : .runExHelperQuit: no visible binding for global variable
  '.cwd'
  runExamples : .runExHelperQuit: no visible binding for global variable
  '.cls'
  showHelp: no visible binding for global variable 'remote'
  sortHistory: no visible binding for global variable 'PBS.history'
  testWidgets : .testWidHelper: no visible binding for global variable
  'wN'
  viewCode: no visible binding for global variable 'remote'
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of 'data' directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking compiled code ... OK
• checking sizes of PDF files under 'inst/doc' ... OK
• checking examples ...
  ** running examples for arch 'i386' ... OK
  ** running examples for arch 'x64' ... OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in 'inst/doc' ... OK
• checking running R code from vignettes ... OK
• checking re-building of vignette PDFs ... OK
• checking PDF version of manual ... OK