• using R version 2.14.2 (2012-02-29)
• using platform: i386-apple-darwin9.8.0 (32-bit)
• using session charset: ASCII
• checking for file 'spacetime/DESCRIPTION' ... OK
• this is package 'spacetime' version '0.6-2'
• checking package namespace information ... OK
• checking package dependencies ... NOTE
  Packages suggested but not available for checking:
  'rgdal' 'rgeos'
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking whether package 'spacetime' can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of 'data' directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking sizes of PDF files under 'inst/doc' ... OK
• checking examples ... OK
• checking for unstated dependencies in tests ... OK
• checking tests ... OK
  Running 'basic.R'
  Comparing 'basic.Rout' to 'basic.Rout.save' ... OK
  Running 'over.R'
  Comparing 'over.Rout' to 'over.Rout.save' ... OK
  Running 'stconstruct.R'
  Comparing 'stconstruct.Rout' to 'stconstruct.Rout.save' ...19,22c19
  < Checking rgeos availability: FALSE
  < Note: when rgeos is not available, polygon geometry computations in maptools depend on gpclib,
  < which has a restricted licence. It is disabled by default;
  < to enable gpclib, type gpclibPermit()
  ---
  > Checking rgeos availability: TRUE
  Running 'traj.R'
  Comparing 'traj.Rout' to 'traj.Rout.save' ...14,17c14
  < Checking rgeos availability: FALSE
  < Note: when rgeos is not available, polygon geometry computations in maptools depend on gpclib,
  < which has a restricted licence. It is disabled by default;
  < to enable gpclib, type gpclibPermit()
  ---
  > Checking rgeos availability: TRUE
  29c26
  < spatstat 1.25-5
  ---
  > spatstat 1.25-4
  Running 'wind.R'
  Comparing 'wind.Rout' to 'wind.Rout.save' ...104,106c104,109
  < Warning message:
  < In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
  < there is no package called 'rgdal'
  ---
  > Geospatial Data Abstraction Library extensions to R successfully loaded
  > Loaded GDAL runtime: GDAL 1.8.0, released 2011/01/12
  > Path to GDAL shared files: /usr/share/gdal/1.8
  > Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470]
  > Path to PROJ.4 shared files: (autodetected)
  > Checking rgeos availability: TRUE
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in 'inst/doc' ... OK
• checking running R code from vignettes ... WARNING
  Errors in running code in vignettes:
  when running code in 'spacetime.Rnw'
  ...
  
  > rownames(pts) = wind.loc$Station
  
  > pts = SpatialPoints(pts, CRS("+proj=longlat +datum=WGS84"))
  
  > library("rgdal")
  
  When sourcing 'spacetime.R':
  Error: there is no package called 'rgdal'
  Execution halted
  when running code in 'sto.Rnw'
  ...
  
  > stplot(x, mode = "tp")
  
  > print(stplot(x, mode = "tp", par.strip.text = list(cex = 0.5)))
  
  > library(rgeos)
  
  When sourcing 'sto.R':
  Error: there is no package called 'rgeos'
  Execution halted
  
• checking re-building of vignette PDFs ... NOTE
  Error in re-building vignettes:
  ...
  as.Date, as.Date.numeric
  
  Loading required package: xts
  Loading required package: lattice
  Checking rgeos availability: FALSE
  Note: when rgeos is not available, polygon geometry computations in maptools depend on gpclib,
  which has a restricted licence. It is disabled by default;
  to enable gpclib, type gpclibPermit()
  Loading required package: bdsmatrix
  
  Attaching package: 'bdsmatrix'
  
  The following object(s) are masked from 'package:base':
  
  backsolve
  
  Loading required package: nlme
  Loading required package: Formula
  Loading required package: MASS
  Loading required package: sandwich
  
  Error: processing vignette 'spacetime.Rnw' failed with diagnostics:
  chunk 35
  Error in library("rgdal") : there is no package called 'rgdal'
  Execution halted
  
• checking PDF version of manual ... OK
  WARNING: There was 1 warning, see
  '/Volumes/Tiger/Builds/Rdev-web/QA/Simon/packages/leopard-universal/results/2.14/spacetime.Rcheck/00check.log'
  for details
• elapsed time (check, wall clock): 2:07