• using R version 2.13.0 Under development (unstable) (2011-03-13 r54781)
  • using platform: i386-apple-darwin9.8.0 (32-bit)
  • using session charset: ASCII
  • checking for file 'segclust/DESCRIPTION' ... OK
  • this is package 'segclust' version '0.76'
  • checking package name space information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking for executable files ... OK
  • checking whether package 'segclust' can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • loading checks for arch 'i386'
    ** checking whether the package can be loaded ... OK
    ** checking whether the package can be loaded with stated dependencies ... OK
    ** checking whether the package can be unloaded cleanly ... OK
    ** checking whether the name space can be loaded with stated dependencies ... OK
    ** checking whether the name space can be unloaded cleanly ... OK
  • loading checks for arch 'ppc'
    ** checking whether the package can be loaded ... OK
    ** checking whether the package can be loaded with stated dependencies ... OK
    ** checking whether the package can be unloaded cleanly ... OK
    ** checking whether the name space can be loaded with stated dependencies ... OK
    ** checking whether the name space can be unloaded cleanly ... OK
  • loading checks for arch 'x86_64'
    ** checking whether the package can be loaded ... OK
    ** checking whether the package can be loaded with stated dependencies ... OK
    ** checking whether the package can be unloaded cleanly ... OK
    ** checking whether the name space can be loaded with stated dependencies ... OK
    ** checking whether the name space can be unloaded cleanly ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... OK
  • checking Rd files ... NOTE
    prepare_Rd: segselect.Rd:10: Dropping empty section \details
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... WARNING
    Assignments in \usage in documentation object 'DPEM':
    output <- DPEM(x, Pmin, Pmax, Kmax, method, draw, lmin = 1, lmax = length(x),
    vh = TRUE, S = 0.5)

    Assignments in \usage in documentation object 'clustersegments':
    out <- clustersegments(x, P, bp, vh = TRUE)

    Assignments in \usage in documentation object 'hybrid':
    out.hybrid <- hybrid(x, P, Kmax, lmin = 1, lmax = length(x),
    vh = TRUE)

    Assignments in \usage in documentation object 'segclustout':
    out <- segclustout(x, param, P, K, draw)

    Assignments in \usage in documentation object 'segclustselect':
    out <- segclustselect(x, param, Pmin, Pmax, Kmax, Linc, method,
    S = 0.5, lmin = 1, lmax = length(x), vh = TRUE)

    Assignments in \usage in documentation object 'segmean':
    out <- segmean(x, Kmax, lmin = 1, lmax = length(x), vh = TRUE)

    Assignments in \usage in documentation object 'segmixt':
    out <- segmixt(x, P, Kmax, phi, lmin = 1, lmax = length(x))

    Assignments in \usage in documentation object 'segout':
    out <- segclustout(x, K, th, draw, vh = TRUE)

    Assignments in \usage in documentation object 'segselect':
    out <- segselect(J, Kmax, S = 0.5)

    Functions with \usage entries need to have the appropriate \alias
    entries, and all their arguments documented.
    The \usage entries must correspond to syntactically valid R code.
    See the chapter 'Writing R documentation files' in manual 'Writing R
    Extensions'.
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking line endings in Makefiles ... OK
  • checking for portable compilation flags in Makevars ... OK
  • checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
  • checking examples ...
    ** running examples for arch 'i386' ... OK
    ** running examples for arch 'ppc' ... OK
    ** running examples for arch 'x86_64' ... OK
  • checking PDF version of manual ... OK
    WARNING: There was 1 warning, see
    '/Volumes/Tiger/Builds/Rdev-web/QA/Simon/packages/leopard-universal/results/2.13/segclust.Rcheck/00check.log'
    for details
  • elapsed time (check, wall clock): 1:11