• using R version 2.13.0 Patched (2011-05-04 r55760)
• using platform: i386-apple-darwin9.8.0 (32-bit)
• using session charset: ASCII
• checking for file 'rgenoud/DESCRIPTION' ... OK
• this is package 'rgenoud' version '5.7-3'
• checking package name space information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking for executable files ... OK
• checking whether package 'rgenoud' can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• loading checks for arch 'i386'
  ** checking whether the package can be loaded ... OK
  ** checking whether the package can be loaded with stated dependencies ... OK
  ** checking whether the package can be unloaded cleanly ... OK
  ** checking whether the name space can be loaded with stated dependencies ... OK
  ** checking whether the name space can be unloaded cleanly ... OK
• loading checks for arch 'x86_64'
  ** checking whether the package can be loaded ... OK
  ** checking whether the package can be loaded with stated dependencies ... OK
  ** checking whether the package can be unloaded cleanly ... OK
  ** checking whether the name space can be loaded with stated dependencies ... OK
  ** checking whether the name space can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  genoud : fnLexicalSort: no visible binding for global variable 'indx'
  genoud: multiple local function definitions for 'fn1.bfgs' with
  different formal arguments
  genoud: multiple local function definitions for 'gr1' with different
  formal arguments
  genoud: multiple local function definitions for 'hess.fn' with
  different formal arguments
  genoud_transform : fnLexicalSort: no visible binding for global
  variable 'indx'
  genoud_transform: multiple local function definitions for 'fn1.bfgs'
  with different formal arguments
  genoud_transform: multiple local function definitions for 'gr1' with
  different formal arguments
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking sizes of PDF files under inst/doc ... OK
• checking examples ...
  ** running examples for arch 'i386' ... OK
  ** running examples for arch 'x86_64' ... OK
• checking for unstated dependencies in tests ... OK
• checking tests ...
  ** running tests for arch 'i386' OK
  Running 'tests.R'
  Comparing 'tests.Rout' to 'tests.Rout.save' ...11c11
  < Thu May 5 03:37:01 2011
  ---
  > Wed May 4 00:50:43 2011
  169,170c169,170
  < Thu May 5 03:37:03 2011
  < Total run time : 0 hours 0 minutes and 2 seconds
  ---
  > Wed May 4 00:50:44 2011
  > Total run time : 0 hours 0 minutes and 1 seconds
  198c198
  < Thu May 5 03:37:03 2011
  ---
  > Wed May 4 00:50:44 2011
  356,357c356,357
  < Thu May 5 03:37:04 2011
  < Total run time : 0 hours 0 minutes and 1 seconds
  ---
  > Wed May 4 00:50:46 2011
  > Total run time : 0 hours 0 minutes and 2 seconds
  392c392
  < Thu May 5 03:37:04 2011
  ---
  > Wed May 4 00:50:46 2011
  550,551c550,551
  < Thu May 5 03:37:07 2011
  < Total run time : 0 hours 0 minutes and 3 seconds
  ---
  > Wed May 4 00:50:48 2011
  > Total run time : 0 hours 0 minutes and 2 seconds
  600c600
  < Thu May 5 03:37:07 2011
  ---
  > Wed May 4 00:50:48 2011
  822,823c822,823
  < Thu May 5 03:37:17 2011
  < Total run time : 0 hours 0 minutes and 10 seconds
  ---
  > Wed May 4 00:50:56 2011
  > Total run time : 0 hours 0 minutes and 8 seconds
  ** running tests for arch 'x86_64' OK
  Running 'tests.R'
  Comparing 'tests.Rout' to 'tests.Rout.save' ...11c11
  < Thu May 5 03:37:18 2011
  ---
  > Wed May 4 00:50:43 2011
  169,170c169,170
  < Thu May 5 03:37:20 2011
  < Total run time : 0 hours 0 minutes and 2 seconds
  ---
  > Wed May 4 00:50:44 2011
  > Total run time : 0 hours 0 minutes and 1 seconds
  198c198
  < Thu May 5 03:37:20 2011
  ---
  > Wed May 4 00:50:44 2011
  356c356
  < Thu May 5 03:37:22 2011
  ---
  > Wed May 4 00:50:46 2011
  392c392
  < Thu May 5 03:37:22 2011
  ---
  > Wed May 4 00:50:46 2011
  550c550
  < Thu May 5 03:37:24 2011
  ---
  > Wed May 4 00:50:48 2011
  600c600
  < Thu May 5 03:37:24 2011
  ---
  > Wed May 4 00:50:48 2011
  822,823c822,823
  < Thu May 5 03:37:33 2011
  < Total run time : 0 hours 0 minutes and 9 seconds
  ---
  > Wed May 4 00:50:56 2011
  > Total run time : 0 hours 0 minutes and 8 seconds
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in 'inst/doc' ... OK
• checking running R code from vignettes ... OK
• checking re-building of vignettes ... OK
• checking PDF version of manual ... OK
• elapsed time (check, wall clock): 1:45