• using R version 2.14.0 RC (2011-10-24 r57417)
  • using platform: i386-apple-darwin9.8.0 (32-bit)
  • using session charset: ASCII
  • checking for file 'relations/DESCRIPTION' ... OK
  • this is package 'relations' version '0.6'
  • package encoding: UTF-8
  • checking package namespace information ... OK
  • checking package dependencies ... NOTE
    Packages suggested but not available for checking:
    'Rgraphviz' 'clue'

    Packages which this enhances but not available for checking:
    'seriation' 'Rcplex'
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking whether package 'relations' can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... OK
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... NOTE
    Package(s) unavailable to check Rd xrefs: 'clue'
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of 'data' directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking sizes of PDF files under 'inst/doc' ... OK
  • checking examples ... WARNING
    checking a package with encoding 'UTF-8' in an ASCII locale

    ERROR
    Running examples in 'relations-Ex.R' failed
    The error most likely occurred in:

    > ### Name: reduction
    > ### Title: Transitive and Reflexive Reduction
    > ### Aliases: transitive_reduction reflexive_reduction reduction.relation
    > ### Keywords: math
    >
    > ### ** Examples
    >
    > R <- as.relation(1 : 5)
    > relation_incidence(R)
    Incidences:
    1L 2L 3L 4L 5L
    1L 1 1 1 1 1
    2L 0 1 1 1 1
    3L 0 0 1 1 1
    4L 0 0 0 1 1
    5L 0 0 0 0 1
    >
    > ## transitive closure/reduction
    > RR <- transitive_reduction(R)
    > relation_incidence(RR)
    Incidences:
    1L 2L 3L 4L 5L
    1L 1 1 0 0 0
    2L 0 1 1 0 0
    3L 0 0 1 1 0
    4L 0 0 0 1 1
    5L 0 0 0 0 1
    > R == transitive_closure(RR)
    [1] TRUE
    >
    > ## same
    > R == closure(reduction(R))
    [1] TRUE
    >
    > ## reflexive closure/reduction
    >
    > RR <- reflexive_reduction(R)
    > relation_incidence(RR)
    Incidences:
    1L 2L 3L 4L 5L
    1L 0 1 1 1 1
    2L 0 0 1 1 1
    3L 0 0 0 1 1
    4L 0 0 0 0 1
    5L 0 0 0 0 0
    > R == reflexive_closure(RR)
    [1] TRUE
    >
    > ## same:
    > R == closure(reduction(R, "reflexive"), "reflexive")
    [1] TRUE
    >
    > ## transitive reduction of a cyclic relation:
    > ## (example from La Poutre and van Leeuwen)
    >
    > G <- set(pair(1L, 2L), pair(2L, 1L), pair(1L, 3L), pair(3L, 1L),
    + pair(3L, 7L), pair(2L, 5L), pair(2L, 6L), pair(6L, 5L),
    + pair(5L, 7L), pair(4L, 6L), pair(5L, 4L), pair(4L, 7L))
    > R <- endorelation(graph = G)
    > plot(relation_ensemble(R, R), type = c("raw", "simplified"), main =
    + c("original graph", "transitive reduction"))
    Loading required package: Rgraphviz
    Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
    there is no package called 'Rgraphviz'
    Error in plot.relation_ensemble(relation_ensemble(R, R), type = c("raw", :
    Plotting requires package 'Rgraphviz'.
    Calls: plot -> plot.relation_ensemble
    Execution halted
  • elapsed time (check, wall clock): 0:33