• using R version 2.9.0 (2009-04-17)
  • using session charset: ASCII
  • checking for file 'gclus/DESCRIPTION' ... OK
  • this is package 'gclus' version '1.2'
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking for executable files ... OK
  • checking whether package 'gclus' can be installed ... WARNING
    Found the following significant warnings:
    Warning: unmatched right brace in file 'hclust.Rd' on line 83
    Warning: invalid whitespace before brace in file 'utilities.Rd' at ' \item{m} {is a matrix.}'
    See http://www.r-project.org/nosvn/R.check/r-oldrel-macosx-ix86/gclus-00install.html for details.
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking for unstated dependencies in R code ... WARNING
    'library' or 'require' calls not declared from:
    cluster
    See the information on DESCRIPTION files in the chapter 'Creating R
    packages' of the 'Writing R Extensions' manual.
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    ac: no visible global function definition for 'agnes'
    sil: no visible global function definition for 'silhouette'
  • checking Rd files ... WARNING
    Rd files with unknown sections:
    body.Rd: reference
    wine.Rd: reference

    See the chapter 'Writing R documentation files' in manual 'Writing R
    Extensions'.
  • checking Rd files against version 2 parser ... WARNING
    *** error on file ./man/body.Rd
    Error in parse_Rd("./man/body.Rd", encoding = "unknown") :
    ./man/body.Rd:69:1: unexpected UNKNOWN
    68: }
    69: \reference
    ^

    *** error on file ./man/hclust.Rd
    Error in parse_Rd("./man/hclust.Rd", encoding = "unknown") :
    ./man/hclust.Rd:83:1: unexpected '}'
    82:
    83: }
    ^

    Warning in parse_Rd("./man/utilities.Rd", encoding = "unknown") :
    bad markup (extra space?) at utilities.Rd:43:10
    Warning: ./man/utilities.Rd:43: Unnecessary braces at '{is a matrix.}'
    *** error on file ./man/wine.Rd
    Error in parse_Rd("./man/wine.Rd", encoding = "unknown") :
    ./man/wine.Rd:39:1: unexpected UNKNOWN
    38: }
    39: \reference
    ^

    problems found in 'body.Rd', 'hclust.Rd', 'wine.Rd'
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... NOTE
    S3 methods shown with full name in documentation object 'reorder.hclust':
    reorder.hclust

    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See the chapter 'Writing R documentation files' in manual 'Writing R
    Extensions'.
  • checking data for non-ASCII characters ... OK
  • checking examples ... OK
  • checking PDF version of manual ... OK
  • elapsed time (check, wall clock): 0:17