• using R version 2.9.0 (2009-04-17)
• using session charset: ASCII
• checking for file 'diffractometry/DESCRIPTION' ... OK
• checking extension type ... Package
• this is package 'diffractometry' version '0.1-00'
• checking package name space information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking for executable files ... OK
• checking whether package 'diffractometry' can be installed ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the name space can be loaded with stated dependencies ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... OK
• checking Rd files against version 2 parser ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking data for non-ASCII characters ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable use of $BLAS_LIBS ... OK
• checking examples ... ERROR
  Running examples in 'diffractometry-Ex.R' failed.
  The error most likely occurred in:
  
  > ### * diffractogram
  >
  > flush(stderr()); flush(stdout())
  >
  > ### Name: diffractogram
  > ### Title: Complete analysis of diffractograms as described in Davies et
  > ### al. (2008)
  > ### Aliases: diffractogram
  >
  >
  > ### ** Examples
  >
  >
  > ## Complete Analysis of a segment from indiumoxide data:
  > ## Identification of baseline and peak as well as decomposition of the peaks
  > ## Plot shows baseline and decomposition of first found peak into two components
  >
  > par(mfrow=c(3,1))
  >
  > data(indiumoxide)
  > indox<-indiumoxide[1901:2400,]
  >
  > sol<-diffractogram(indox,maxsolutions=1)
  [1] "q:" "2"
  [1] "sigma:" "8.3868521102974"
  [1] "thresh:" "33.0579457479864"
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  [1] "Median" "0.0932724956911954"
  [1] "MAD" "0.124441295402958"
  [1] "q:" "2"
  [1] "sigma:" "7.33849559651023"
  [1] "thresh:" "33.0579457479864"
  Iteration: 1
  Error in basiserg(data[, 1], pmg$y, bs$reg, exb$indl, exb$indr, indextr) :
  NA/NaN/Inf in foreign function call (arg 5)
  Calls: diffractogram -> baselinefit -> basiserg -> .C
  Execution halted
• elapsed time (check, wall clock): 0:19