• using R version 2.15.3 (2013-03-01)
  • using platform: i386-apple-darwin9.8.0 (32-bit)
  • using session charset: ASCII
  • checking for file 'Matrix/DESCRIPTION' ... OK
  • this is package 'Matrix' version '1.0-12'
  • package encoding: UTF-8
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking whether package 'Matrix' can be installed ... OK
  • checking installed package size ... NOTE
    installed size is 7.9Mb
    sub-directories of 1Mb or more:
    R 1.9Mb
    libs 4.1Mb
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • loading checks for arch 'i386'
    ** checking whether the package can be loaded ... OK
    ** checking whether the package can be loaded with stated dependencies ... OK
    ** checking whether the package can be unloaded cleanly ... OK
    ** checking whether the namespace can be loaded with stated dependencies ... OK
    ** checking whether the namespace can be unloaded cleanly ... OK
  • loading checks for arch 'x86_64'
    ** checking whether the package can be loaded ... OK
    ** checking whether the package can be loaded with stated dependencies ... OK
    ** checking whether the package can be unloaded cleanly ... OK
    ** checking whether the namespace can be loaded with stated dependencies ... OK
    ** checking whether the namespace can be unloaded cleanly ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... OK
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of 'data' directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking line endings in Makefiles ... OK
  • checking for portable compilation flags in Makevars ... OK
  • checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
  • checking compiled code ... OK
  • checking sizes of PDF files under 'inst/doc' ... OK
  • checking installed files from 'inst/doc' ... OK
  • checking examples ... WARNING
    checking a package with encoding 'UTF-8' in an ASCII locale


    ** running examples for arch 'i386' ... OK
    ** running examples for arch 'x86_64' ... OK
  • checking for unstated dependencies in tests ... OK
  • checking tests ...
    ** running tests for arch 'i386' OK
    Running 'Class+Meth.R'
    Running 'Simple.R'
    Running 'abIndex-tsts.R'
    Running 'base-matrix-fun.R'
    Running 'bind.R'
    Comparing 'bind.Rout' to 'bind.Rout.save' ... OK
    Running 'dg_Matrix.R'
    Running 'dpo-test.R'
    Running 'dtpMatrix.R'
    Running 'factorizing.R'
    Running 'group-methods.R'
    Running 'indexing.R'
    Comparing 'indexing.Rout' to 'indexing.Rout.save' ...284c284
    < Note: Method with signature 'nsparseMatrix#sparseMatrix' chosen for function '==',
    ---
    > Note: method with signature 'nsparseMatrix#sparseMatrix' chosen for function '==',
    854c854
    < Note: Method with signature 'sparseMatrix#ldiMatrix' chosen for function '==',
    ---
    > Note: method with signature 'sparseMatrix#ldiMatrix' chosen for function '==',
    890c890
    < 2*m =?= m+m: Note: Method with signature 'sparseMatrix#ldiMatrix' chosen for function '&',
    ---
    > 2*m =?= m+m: Note: method with signature 'sparseMatrix#ldiMatrix' chosen for function '&',
    1286c1286
    < Note: Method with signature 'sparseMatrix#ANY' chosen for function 'kronecker',
    ---
    > Note: method with signature 'sparseMatrix#ANY' chosen for function 'kronecker',
    Running 'matprod.R'
    Running 'matr-exp.R'
    Running 'other-pkgs.R'
    Running 'spModel.matrix.R'
    Running 'validObj.R'
    Running 'write-read.R'
    ** running tests for arch 'x86_64' OK
    Running 'Class+Meth.R'
    Running 'Simple.R'
    Running 'abIndex-tsts.R'
    Running 'base-matrix-fun.R'
    Running 'bind.R'
    Comparing 'bind.Rout' to 'bind.Rout.save' ... OK
    Running 'dg_Matrix.R'
    Running 'dpo-test.R'
    Running 'dtpMatrix.R'
    Running 'factorizing.R'
    Running 'group-methods.R'
    Running 'indexing.R'
    Comparing 'indexing.Rout' to 'indexing.Rout.save' ...284c284
    < Note: Method with signature 'nsparseMatrix#sparseMatrix' chosen for function '==',
    ---
    > Note: method with signature 'nsparseMatrix#sparseMatrix' chosen for function '==',
    854c854
    < Note: Method with signature 'sparseMatrix#ldiMatrix' chosen for function '==',
    ---
    > Note: method with signature 'sparseMatrix#ldiMatrix' chosen for function '==',
    890c890
    < 2*m =?= m+m: Note: Method with signature 'sparseMatrix#ldiMatrix' chosen for function '&',
    ---
    > 2*m =?= m+m: Note: method with signature 'sparseMatrix#ldiMatrix' chosen for function '&',
    1286c1286
    < Note: Method with signature 'sparseMatrix#ANY' chosen for function 'kronecker',
    ---
    > Note: method with signature 'sparseMatrix#ANY' chosen for function 'kronecker',
    Running 'matprod.R'
    Running 'matr-exp.R'
    Running 'other-pkgs.R'
    Running 'spModel.matrix.R'
    Running 'validObj.R'
    Running 'write-read.R'
  • checking for unstated dependencies in vignettes ... OK
  • checking package vignettes in 'inst/doc' ... OK
  • checking running R code from vignettes ... OK
  • checking re-building of vignette PDFs ... OK
  • checking PDF version of manual ... OK
    WARNING: There was 1 warning.
    NOTE: There was 1 note.
    See
    '/Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/results/2.15/Matrix.Rcheck/00check.log'
    for details.
  • elapsed time (check, wall clock): 11:16