• using R version 2.9.1 (2009-06-26)
  • using session charset: ASCII
  • checking for file 'MIfuns/DESCRIPTION' ... OK
  • checking extension type ... Package
  • this is package 'MIfuns' version '3.2.9'
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking for executable files ... OK
  • checking whether package 'MIfuns' can be installed ... OK
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    compute.cwres: no visible binding for global variable 'ID'
    compute.cwres: no visible binding for global variable 'MDV'
    diagnostics: no visible binding for global variable 'variable'
    is.cwres.readable.file: no visible global function definition for
    'platform'
    is.cwres.readable.file: no visible global function definition for
    'access'
    mcmc.history: no visible binding for global variable 'chain'
    parameter.plot.table: no visible global function definition for
    'mcmc.list'
    parameter.plot.table: no visible binding for global variable 'n.chains'
    parameter.plot.table : <anonymous>: no visible global function
    definition for 'mcmc'
    parameter.plot.table: no visible global function definition for
    'gelman.plot'
    parameter.plot.table: no visible global function definition for
    'effectiveSize'
    save.model: no visible binding for global variable 'n.chains'
  • checking Rd files ... OK
  • checking Rd files against version 2 parser ... WARNING
    Warning: ./man/ComputePredictiveCheck.Rd:36: Unnecessary braces at '{SimulatedData}'
    Warning: ./man/ComputePredictiveCheck.Rd:38: Unnecessary braces at '{SimulatedData}'
    Warning: ./man/ComputePredictiveCheck.Rd:60: Unnecessary braces at '{CombFun}'
    Warning: ./man/TruncateParametersForSimulation.Rd:15: Unnecessary braces at '{parameters}'
    *** error on file ./man/compute.cwres.Rd
    Error : ./man/compute.cwres.Rd:64: Unrecognized macro \item

    *** error on file ./man/myshell.Rd
    Error : ./man/myshell.Rd:7: Unrecognized macro \quote

    problems found in 'compute.cwres.Rd', 'myshell.Rd'
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking data for non-ASCII characters ... OK
  • checking examples ... OK
  • checking PDF version of manual ... OK
  • elapsed time (check, wall clock): 1:47