• using R version 2.13.0 Under development (unstable) (2011-02-27 r54614)
• using platform: i386-apple-darwin9.8.0 (32-bit)
• using session charset: ASCII
• checking for file 'FAiR/DESCRIPTION' ... OK
• checking extension type ... Package
• this is package 'FAiR' version '0.4-7'
• package encoding: UTF-8
• checking package name space information ... OK
• checking package dependencies ... NOTE
  Package suggested but not available for checking: Rgraphviz
• checking if this is a source package ... OK
• checking for executable files ... OK
• checking whether package 'FAiR' can be installed ... WARNING
  Found the following significant warnings:
  Warning: 'DESCRIPTION' file has 'Encoding' field and re-encoding is not possible
  Warning: 'DESCRIPTION' file has 'Encoding' field and re-encoding is not possible
  WARNING: It appears you are using a Mac.
  See http://www.r-project.org/nosvn/R.check/r-oldrel-macosx-ix86/FAiR-00install.html for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• loading checks for arch 'i386'
  ** checking whether the package can be loaded ... OK
  ** checking whether the package can be loaded with stated dependencies ... OK
  ** checking whether the package can be unloaded cleanly ... OK
  ** checking whether the name space can be loaded with stated dependencies ... OK
  ** checking whether the name space can be unloaded cleanly ... OK
• loading checks for arch 'ppc'
  ** checking whether the package can be loaded ... OK
  ** checking whether the package can be loaded with stated dependencies ... OK
  ** checking whether the package can be unloaded cleanly ... OK
  ** checking whether the name space can be loaded with stated dependencies ... OK
  ** checking whether the name space can be unloaded cleanly ... OK
• loading checks for arch 'x86_64'
  ** checking whether the package can be loaded ... OK
  ** checking whether the package can be loaded with stated dependencies ... OK
  ** checking whether the package can be unloaded cleanly ... OK
  ** checking whether the name space can be loaded with stated dependencies ... OK
  ** checking whether the name space can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  FAiR_DAG: no visible global function definition for 'nodes'
  FAiR_DAG: no visible global function definition for 'addEdge'
  FAiR_DAG: no visible global function definition for 'subGraph'
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... WARNING
  Missing link(s) in documentation object '/Volumes/Tiger/Builds/Rdev-web/QA/Simon/packages/leopard-universal/results/2.13/FAiR.Rcheck/00_pkg_src/FAiR/man/model_comparison.Rd':
  '[stats4]{BIC}'
  
  See the information in section 'Cross-references' of the 'Writing R
  Extensions' manual.
  
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking sizes of PDF files under inst/doc ... OK
• checking examples ... WARNING
  checking a package with encoding 'UTF-8' in an ASCII locale
  
  
  ** running examples for arch 'i386' ... OK
  ** running examples for arch 'ppc' ... OK
  ** running examples for arch 'x86_64' ... OK
• checking for unstated dependencies in tests ... OK
• checking tests ...
  ** running tests for arch 'i386' OK
  ** running tests for arch 'x86_64' OK
• checking package vignettes in 'inst/doc' ... OK
• checking PDF version of manual ... OK
  WARNING: There were 3 warnings, see
  '/Volumes/Tiger/Builds/Rdev-web/QA/Simon/packages/leopard-universal/results/2.13/FAiR.Rcheck/00check.log'
  for details
• elapsed time (check, wall clock): 7:40