• using R version 2.13.0 Under development (unstable) (2011-03-02 r54645)
• using platform: i386-apple-darwin9.8.0 (32-bit)
• using session charset: ASCII
• checking for file 'BaM/DESCRIPTION' ... OK
• this is package 'BaM' version '0.99'
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking for executable files ... OK
• checking whether package 'BaM' can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... NOTE
  biv.norm.post: possible error in rwishart(alpha + n, SqrtSigma =
  chol(solve(Wp.inv))): unused argument(s) (SqrtSigma =
  chol(solve(Wp.inv)))
  biv.norm.post: no visible global function definition for 'rmultinorm'
  mhplot.walk.MH: possible error in mhplot(walk.mat[1, 1], walk.mat[1,
  2], type = "n", xlim = round(range(walk.mat[, 1]) * 1.2), ylim =
  round(range(walk.mat[, 2]) * 1.2), xlab = "", ylab = ""): unused
  argument(s) (walk.mat[1, 2], type = "n", xlim =
  round(range(walk.mat[, 1]) * 1.2), ylim = round(range(walk.mat[, 2])
  * 1.2), xlab = "", ylab = "")
  sir: no visible binding for global variable 'normal.posterior.ll'
  sir: no visible binding for global variable 't.posterior.ll'
  Found possibly global 'T' or 'F' in the following function:
  sir
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of 'data' directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... OK
• checking PDF version of manual ... OK
• elapsed time (check, wall clock): 0:31