• using R version 2.13.0 Patched (2011-05-03 r55748)
  • using platform: i386-apple-darwin9.8.0 (32-bit)
  • using session charset: ASCII
  • checking for file 'BARD/DESCRIPTION' ... OK
  • checking extension type ... Package
  • this is package 'BARD' version '1.24'
  • checking package name space information ... OK
  • checking package dependencies ... NOTE
    Package which this enhances but not available for checking: rgdal
  • checking if this is a source package ... OK
  • checking for executable files ... OK
  • checking whether package 'BARD' can be installed ... OK
  • checking installed package size ... NOTE
    installed size is 8.0Mb
    sub-directories of 1Mb or more:
    doc 3.5Mb
    shapefiles 3.6Mb
  • checking package directory ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • loading checks for arch 'i386'
    ** checking whether the package can be loaded ... OK
    ** checking whether the package can be loaded with stated dependencies ... OK
    ** checking whether the package can be unloaded cleanly ... OK
    ** checking whether the name space can be loaded with stated dependencies ... OK
    ** checking whether the name space can be unloaded cleanly ... OK
  • loading checks for arch 'x86_64'
    ** checking whether the package can be loaded ... OK
    ** checking whether the package can be loaded with stated dependencies ... OK
    ** checking whether the package can be unloaded cleanly ... OK
    ** checking whether the name space can be loaded with stated dependencies ... OK
    ** checking whether the name space can be unloaded cleanly ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... NOTE
    lapplyBardCluster.snow: no visible binding for global variable
    'clusterApplyLB'
    lapplyBardCluster.snow: no visible binding for global variable
    'parLapply'
    myUnionSpatialPolygons: no visible global function definition for
    'gUnionCascaded'
    plot.grob: no visible global function definition for 'grid.draw'
    reportPlans: no visible global function definition for 'HTMLInitFile'
    reportPlans: no visible global function definition for 'HTML.title'
    reportPlans: no visible global function definition for 'HTMLEndFile'
    RGEOSgeomCleaner : quietGisValid: no visible global function definition
    for 'gIsValid'
    RGEOSgeomCleaner: no visible global function definition for
    'createSPComment'
    RGEOSgeomCleaner: no visible global function definition for 'gBuffer'
    RGEOSgeomCleaner: no visible global function definition for
    'gUnionCascaded'
    sdf2bard: no visible global function definition for 'spTransform'
    startBardCluster: no visible global function definition for
    'makeSOCKcluster'
    startBardCluster: no visible global function definition for 'parLapply'
    stopBardCluster: no visible global function definition for
    'stopCluster'
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of 'data' directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking line endings in Makefiles ... OK
  • checking for portable compilation flags in Makevars ... OK
  • checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
  • checking sizes of PDF files under inst/doc ... NOTE
    'qpdf' made some significant size reductions:
    compacted 'bardJSS.pdf' from 1.3Mb to 1.2Mb
    consider running tools::compactPDF() on these files
  • checking examples ...
    ** running examples for arch 'i386' ... OK
    ** running examples for arch 'x86_64' ... OK
  • checking for unstated dependencies in vignettes ... OK
  • checking package vignettes in 'inst/doc' ... OK
  • checking running R code from vignettes ... OK
  • checking re-building of vignettes ... OK
  • checking PDF version of manual ... OK
  • elapsed time (check, wall clock): 7:20