* installing *source* package ‘rxode2ll’ ... ** package ‘rxode2ll’ successfully unpacked and MD5 sums checked ** using staged installation --------[begin src/Makevars]-------- # -*- mode: makefile-gmake -*- BH=/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include RCPP=/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include EG=/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include SH=-isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src' CXX_STD = CXX17 ################################################################################ ## Package library flags. PKG_LIBS = $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS) $(SHLIB_OPENMP_CXXFLAGS) -L'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/lib/' -Wl,-rpath,'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/lib/' -ltbb -ltbbmalloc # Release options PKG_CFLAGS = -D_isrxode2parse_ PKG_CXXFLAGS = $(SHLIB_OPENMP_CXXFLAGS) -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"$(BH)" -isystem"$(EG)" $(SH) -isystem"$(RCPP)" --------[end src/Makevars]-------- ** libs using C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using C++17 using SDK: ‘MacOSX11.3.sdk’ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -fPIC -falign-functions=64 -Wall -g -O2 -c init.c -o init.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikBeta.cpp -o llikBeta.o In file included from llikBeta.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:283: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable] int n = G.rows(); // number of states ^ In file included from llikBeta.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion] inline static double square(double x) { return square(x); } ^ In file included from llikBeta.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:70: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable] const size_t coupled_size = cvodes_data.coupled_ode_.size(); ^ In file included from llikBeta.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:6: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:46: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function] static void set_zero_all_adjoints() { ^ In file included from llikBeta.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:278: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef] using T_partials_vec = typename Eigen::Matrix; ^ In file included from llikBeta.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:328: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef] using T_alpha_val = typename std::conditional_t< ^ In file included from llikBeta.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:51: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ 8 warnings generated. clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikBinom.cpp -o llikBinom.o In file included from llikBinom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:283: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable] int n = G.rows(); // number of states ^ In file included from llikBinom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion] inline static double square(double x) { return square(x); } ^ In file included from llikBinom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:70: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable] const size_t coupled_size = cvodes_data.coupled_ode_.size(); ^ In file included from llikBinom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:6: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:46: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function] static void set_zero_all_adjoints() { ^ In file included from llikBinom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:278: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef] using T_partials_vec = typename Eigen::Matrix; ^ In file included from llikBinom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:328: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef] using T_alpha_val = typename std::conditional_t< ^ In file included from llikBinom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:51: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ 8 warnings generated. clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikCauchy.cpp -o llikCauchy.o In file included from llikCauchy.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:283: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable] int n = G.rows(); // number of states ^ In file included from llikCauchy.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion] inline static double square(double x) { return square(x); } ^ In file included from llikCauchy.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:70: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable] const size_t coupled_size = cvodes_data.coupled_ode_.size(); ^ In file included from llikCauchy.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:6: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:46: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function] static void set_zero_all_adjoints() { ^ In file included from llikCauchy.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:278: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef] using T_partials_vec = typename Eigen::Matrix; ^ In file included from llikCauchy.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:328: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef] using T_alpha_val = typename std::conditional_t< ^ In file included from llikCauchy.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:51: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ 8 warnings generated. clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikChisq.cpp -o llikChisq.o In file included from llikChisq.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:283: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable] int n = G.rows(); // number of states ^ In file included from llikChisq.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion] inline static double square(double x) { return square(x); } ^ In file included from llikChisq.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:70: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable] const size_t coupled_size = cvodes_data.coupled_ode_.size(); ^ In file included from llikChisq.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:6: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:46: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function] static void set_zero_all_adjoints() { ^ In file included from llikChisq.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:278: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef] using T_partials_vec = typename Eigen::Matrix; ^ In file included from llikChisq.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:328: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef] using T_alpha_val = typename std::conditional_t< ^ In file included from llikChisq.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:51: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ 8 warnings generated. clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikExp.cpp -o llikExp.o In file included from llikExp.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:283: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable] int n = G.rows(); // number of states ^ In file included from llikExp.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion] inline static double square(double x) { return square(x); } ^ In file included from llikExp.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:70: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable] const size_t coupled_size = cvodes_data.coupled_ode_.size(); ^ In file included from llikExp.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:6: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:46: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function] static void set_zero_all_adjoints() { ^ In file included from llikExp.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:278: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef] using T_partials_vec = typename Eigen::Matrix; ^ In file included from llikExp.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:328: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef] using T_alpha_val = typename std::conditional_t< ^ In file included from llikExp.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:51: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ 8 warnings generated. clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikF.cpp -o llikF.o In file included from llikF.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:283: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable] int n = G.rows(); // number of states ^ In file included from llikF.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion] inline static double square(double x) { return square(x); } ^ In file included from llikF.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:70: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable] const size_t coupled_size = cvodes_data.coupled_ode_.size(); ^ In file included from llikF.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:6: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:46: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function] static void set_zero_all_adjoints() { ^ In file included from llikF.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:278: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef] using T_partials_vec = typename Eigen::Matrix; ^ In file included from llikF.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:328: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef] using T_alpha_val = typename std::conditional_t< ^ In file included from llikF.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:51: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ 8 warnings generated. clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikGamma.cpp -o llikGamma.o In file included from llikGamma.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:283: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable] int n = G.rows(); // number of states ^ In file included from llikGamma.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion] inline static double square(double x) { return square(x); } ^ In file included from llikGamma.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:70: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable] const size_t coupled_size = cvodes_data.coupled_ode_.size(); ^ In file included from llikGamma.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:6: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:46: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function] static void set_zero_all_adjoints() { ^ In file included from llikGamma.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:278: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef] using T_partials_vec = typename Eigen::Matrix; ^ In file included from llikGamma.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:328: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef] using T_alpha_val = typename std::conditional_t< ^ In file included from llikGamma.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:51: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ 8 warnings generated. clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikGeom.cpp -o llikGeom.o In file included from llikGeom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:283: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable] int n = G.rows(); // number of states ^ In file included from llikGeom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion] inline static double square(double x) { return square(x); } ^ In file included from llikGeom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:70: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable] const size_t coupled_size = cvodes_data.coupled_ode_.size(); ^ In file included from llikGeom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:6: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:46: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function] static void set_zero_all_adjoints() { ^ In file included from llikGeom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:278: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef] using T_partials_vec = typename Eigen::Matrix; ^ In file included from llikGeom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:328: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef] using T_alpha_val = typename std::conditional_t< ^ In file included from llikGeom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:51: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ 8 warnings generated. clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikNbinom.cpp -o llikNbinom.o In file included from llikNbinom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:283: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable] int n = G.rows(); // number of states ^ In file included from llikNbinom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion] inline static double square(double x) { return square(x); } ^ In file included from llikNbinom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:70: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable] const size_t coupled_size = cvodes_data.coupled_ode_.size(); ^ In file included from llikNbinom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:6: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:46: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function] static void set_zero_all_adjoints() { ^ In file included from llikNbinom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:278: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef] using T_partials_vec = typename Eigen::Matrix; ^ In file included from llikNbinom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:328: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef] using T_alpha_val = typename std::conditional_t< ^ In file included from llikNbinom.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:51: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ 8 warnings generated. clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikNbinom2.cpp -o llikNbinom2.o In file included from llikNbinom2.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:283: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable] int n = G.rows(); // number of states ^ In file included from llikNbinom2.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion] inline static double square(double x) { return square(x); } ^ In file included from llikNbinom2.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:70: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable] const size_t coupled_size = cvodes_data.coupled_ode_.size(); ^ In file included from llikNbinom2.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:6: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:46: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function] static void set_zero_all_adjoints() { ^ In file included from llikNbinom2.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:278: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef] using T_partials_vec = typename Eigen::Matrix; ^ In file included from llikNbinom2.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:328: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef] using T_alpha_val = typename std::conditional_t< ^ In file included from llikNbinom2.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:51: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ 8 warnings generated. clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikNorm.cpp -o llikNorm.o In file included from llikNorm.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:283: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable] int n = G.rows(); // number of states ^ In file included from llikNorm.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion] inline static double square(double x) { return square(x); } ^ In file included from llikNorm.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:70: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable] const size_t coupled_size = cvodes_data.coupled_ode_.size(); ^ In file included from llikNorm.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:6: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:46: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function] static void set_zero_all_adjoints() { ^ In file included from llikNorm.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:278: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef] using T_partials_vec = typename Eigen::Matrix; ^ In file included from llikNorm.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:328: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef] using T_alpha_val = typename std::conditional_t< ^ In file included from llikNorm.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:51: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ 8 warnings generated. clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikPois.cpp -o llikPois.o In file included from llikPois.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:283: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable] int n = G.rows(); // number of states ^ In file included from llikPois.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion] inline static double square(double x) { return square(x); } ^ In file included from llikPois.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:70: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable] const size_t coupled_size = cvodes_data.coupled_ode_.size(); ^ In file included from llikPois.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:6: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:46: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function] static void set_zero_all_adjoints() { ^ In file included from llikPois.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:278: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef] using T_partials_vec = typename Eigen::Matrix; ^ In file included from llikPois.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:328: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef] using T_alpha_val = typename std::conditional_t< ^ In file included from llikPois.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:51: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ 8 warnings generated. clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikT.cpp -o llikT.o In file included from llikT.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:283: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable] int n = G.rows(); // number of states ^ In file included from llikT.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion] inline static double square(double x) { return square(x); } ^ In file included from llikT.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:70: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable] const size_t coupled_size = cvodes_data.coupled_ode_.size(); ^ In file included from llikT.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:6: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:46: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function] static void set_zero_all_adjoints() { ^ In file included from llikT.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:278: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef] using T_partials_vec = typename Eigen::Matrix; ^ In file included from llikT.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:328: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef] using T_alpha_val = typename std::conditional_t< ^ In file included from llikT.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:51: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ 8 warnings generated. clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikUnif.cpp -o llikUnif.o In file included from llikUnif.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:283: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable] int n = G.rows(); // number of states ^ In file included from llikUnif.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion] inline static double square(double x) { return square(x); } ^ In file included from llikUnif.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:70: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable] const size_t coupled_size = cvodes_data.coupled_ode_.size(); ^ In file included from llikUnif.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:6: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:46: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function] static void set_zero_all_adjoints() { ^ In file included from llikUnif.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:278: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef] using T_partials_vec = typename Eigen::Matrix; ^ In file included from llikUnif.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:328: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef] using T_alpha_val = typename std::conditional_t< ^ In file included from llikUnif.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:51: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ 8 warnings generated. clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I/opt/R/x86_64/include -D_isrxode2parse_ -DBOOST_DISABLE_ASSERTS -DBOOST_NO_CXX11_STATIC_ASSERT -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -D_REENTRANT -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include" -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include" -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -isystem'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src' -isystem"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include" -fPIC -falign-functions=64 -Wall -g -O2 -c llikWeibull.cpp -o llikWeibull.o In file included from llikWeibull.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:283: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/gaussian_dlm_obs_rng.hpp:138:7: warning: unused variable 'n' [-Wunused-variable] int n = G.rows(); // number of states ^ In file included from llikWeibull.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/columns_dot_self.hpp:8: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/dot_self.hpp:38:41: warning: all paths through this function will call itself [-Winfinite-recursion] inline static double square(double x) { return square(x); } ^ In file included from llikWeibull.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:70: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/integrate_ode_adams.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/functor/cvodes_integrator.hpp:126:18: warning: unused variable 'coupled_size' [-Wunused-variable] const size_t coupled_size = cvodes_data.coupled_ode_.size(); ^ In file included from llikWeibull.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:6: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:46: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function] static void set_zero_all_adjoints() { ^ In file included from llikWeibull.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:278: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_lpmf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef] using T_partials_vec = typename Eigen::Matrix; ^ In file included from llikWeibull.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat.hpp:328: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/mat/prob/poisson_log_glm_lpmf.hpp:52:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef] using T_alpha_val = typename std::conditional_t< ^ In file included from llikWeibull.cpp:1: In file included from ./llik2.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat.hpp:51: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:27:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/mat/fun/squared_distance.hpp:64:11: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = typename index_type::type; ^ 8 warnings generated. clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o rxode2ll.so RcppExports.o init.o llikBeta.o llikBinom.o llikCauchy.o llikChisq.o llikExp.o llikF.o llikGamma.o llikGeom.o llikNbinom.o llikNbinom2.o llikNorm.o llikPois.o llikT.o llikUnif.o llikWeibull.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -L/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/lib/ -Wl,-rpath,/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/lib/ -ltbb -ltbbmalloc -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.3/rxode2ll.Rcheck/00LOCK-rxode2ll/00new/rxode2ll/libs ** generating debug symbols (dSYM) ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rxode2ll)