* installing *source* package ‘pcaL1’ ... ** package ‘pcaL1’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... clang -arch x86_64 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether clang -arch x86_64 accepts -g... yes checking for clang -arch x86_64 option to enable C11 features... none needed checking how to run the C preprocessor... clang -arch x86_64 -E checking for pkg-config... /opt/R/x86_64/bin/pkg-config configure: set compile and link flags according to pkg-config configure: compile flags are -I/opt/R/x86_64/include/coin configure: link flags are -L/opt/R/x86_64/lib -lClpSolver -lClp -lc++ -lCoinUtils -lbz2 -lz -lm checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for stdbool.h... yes checking for Clp_C_Interface.h... yes checking for library containing Clp_newModel... none required checking for library containing Clp_setRowName... none required configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using SDK: ‘MacOSX11.3.sdk’ clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c init.c -o init.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c l1pca.c -o l1pca.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c l1pca_R.c -o l1pca_R.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c l1pcahp.c -o l1pcahp.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c l1pcahp_R.c -o l1pcahp_R.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c l1pcastar.c -o l1pcastar.o l1pcastar.c:20:7: warning: variable 'numprojdim' set but not used [-Wunused-but-set-variable] int numprojdim = probleminfo->numprojdim; ^ 1 warning generated. clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c l1pcastar_R.c -o l1pcastar_R.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c l1projection.c -o l1projection.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c l1projection_R.c -o l1projection_R.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c pcal1.c -o pcal1.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c pcal1_R.c -o pcal1_R.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c pcalp.c -o pcalp.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c pcalp_R.c -o pcalp_R.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c sharpel1pca.c -o sharpel1pca.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c sharpel1pca_R.c -o sharpel1pca_R.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c sharpel1rs.c -o sharpel1rs.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c sharpel1rs_R.c -o sharpel1rs_R.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c sparsel1pca.c -o sparsel1pca.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include/coin -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c sparsel1pca_R.c -o sparsel1pca_R.o clang -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o pcaL1.so init.o l1pca.o l1pca_R.o l1pcahp.o l1pcahp_R.o l1pcastar.o l1pcastar_R.o l1projection.o l1projection_R.o pcal1.o pcal1_R.o pcalp.o pcalp_R.o sharpel1pca.o sharpel1pca_R.o sharpel1rs.o sharpel1rs_R.o sparsel1pca.o sparsel1pca_R.o -L/opt/R/x86_64/lib -lClpSolver -lClp -lc++ -lCoinUtils -lbz2 -lz -lm -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.3/pcaL1.Rcheck/00LOCK-pcaL1/00new/pcaL1/libs ** generating debug symbols (dSYM) ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pcaL1)