* installing *source* package ‘numOSL’ ... ** package ‘numOSL’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using Fortran compiler: ‘GNU Fortran (GCC) 12.2.0’ using SDK: ‘MacOSX11.3.sdk’ gfortran -arch x86_64 -fPIC -Wall -g -O2 -c apfmmstd.f90 -o apfmmstd.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c apmamstd.f90 -o apmamstd.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c calDEXPxm.f90 -o calDEXPxm.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c calED1.f90 -o calED1.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c calED_fort.f90 -o calED_fort.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c calSGCED_fort.f90 -o calSGCED_fort.o calSGCED_fort.f90:102:25: 102 | saturateDose = Xm | ^ Warning: ‘xm’ may be used uninitialized [-Wmaybe-uninitialized] calSGCED_fort.f90:37:26: 37 | Xm, Ym, ifmin, sumdose, sumdose2,& | ^ note: ‘xm’ declared here calSGCED_fort.f90:133:16: 133 | if (spltx2>=Ym) then | ^ Warning: ‘ym’ may be used uninitialized [-Wmaybe-uninitialized] calSGCED_fort.f90:37:30: 37 | Xm, Ym, ifmin, sumdose, sumdose2,& | ^ note: ‘ym’ was declared here gfortran -arch x86_64 -fPIC -Wall -g -O2 -c calcSF.f90 -o calcSF.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c camED.f90 -o camED.o calED_fort.f90:240:25: 240 | saturateDose = Xm | ^ Warning: ‘xm’ may be used uninitialized [-Wmaybe-uninitialized] calED_fort.f90:58:58: 58 | simltx(ndat), mcOSL(1), mcDose, Xm, Ym,& | ^ note: ‘xm’ declared here calED_fort.f90:242:12: 242 | if (inltx(1,1)>=Ym) then | ^ Warning: ‘ym’ may be used uninitialized [-Wmaybe-uninitialized] calED_fort.f90:58:62: 58 | simltx(ndat), mcOSL(1), mcDose, Xm, Ym,& | ^ note: ‘ym’ was declared here calcSF.f90:172:31: 172 | if ((fcn .ne. fcn) .or. (fcn .gt. huge(0.0D+00))) fcn = huge(0.0D+00) | ^ Warning: ‘__result_fcn’ may be used uninitialized [-Wmaybe-uninitialized] calcSF.f90:147:4: 147 | function fcn(x) | ^ note: ‘__result_fcn’ was declared here gfortran -arch x86_64 -fPIC -Wall -g -O2 -c comb_next.f90 -o comb_next.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c compED.f90 -o compED.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c decomp_fort.f90 -o decomp_fort.o compED.f90:74:24: 74 | maxlik = cmaxlik | ^ Warning: ‘cmaxlik’ may be used uninitialized [-Wmaybe-uninitialized] compED.f90:32:31: 32 | cmaxlik, cbic, inimu(ncomp+4) | ^ note: ‘cmaxlik’ was declared here compED.f90:75:18: 75 | bic = cbic | ^ Warning: ‘cbic’ may be used uninitialized [-Wmaybe-uninitialized] compED.f90:32:37: 32 | cmaxlik, cbic, inimu(ncomp+4) | ^ note: ‘cbic’ was declared here gfortran -arch x86_64 -fPIC -Wall -g -O2 -c diffev.f90 -o diffev.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c fitGOK.f90 -o fitGOK.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c fitGrowth_fort.f90 -o fitGrowth_fort.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c fmmED.f90 -o fmmED.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c goodComp.f90 -o goodComp.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c hpSort.f90 -o hpSort.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c inipars.f90 -o inipars.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c interpolate.f90 -o interpolate.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c inverse_ger.f90 -o inverse_ger.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c inverse_sym.f90 -o inverse_sym.o inverse_sym.f90:129:26: 129 | real ( kind(1.0d0) ) rsq | 1 Warning: Unused variable ‘rsq’ declared at (1) [-Wunused-variable] interpolate.f90:171:31: 171 | if ((fcn .ne. fcn) .or. (fcn .gt. huge(0.0D+00))) fcn = huge(0.0D+00) | ^ Warning: ‘__result_fcn’ may be used uninitialized [-Wmaybe-uninitialized] interpolate.f90:144:4: 144 | function fcn(x) | ^ note: ‘__result_fcn’ was declared here inverse_ger.f90:97:23: 97 | indxr(i) = irow | ^ Warning: ‘irow’ may be used uninitialized [-Wmaybe-uninitialized] inverse_ger.f90:54:27: 54 | integer:: i, icol, irow, j, k, l, ll,& | ^ note: ‘irow’ was declared here inverse_ger.f90:111:15: 111 | if(ll .ne. icol) then | ^ Warning: ‘icol’ may be used uninitialized [-Wmaybe-uninitialized] inverse_ger.f90:54:21: 54 | integer:: i, icol, irow, j, k, l, ll,& | ^ note: ‘icol’ was declared here gfortran -arch x86_64 -fPIC -Wall -g -O2 -c linefit.f90 -o linefit.o inipars.f90:97:52: 97 | allocate(aMat(ndim,ndim),bMat(ndim,1),stat=alc) | ^ Warning: ‘ndim’ may be used uninitialized [-Wmaybe-uninitialized] inipars.f90:33:18: 33 | integer:: ndim, alc, singular, origin | ^ note: ‘ndim’ declared here inipars.f90:109:8: 109 | if (any(outp(1:ndim-origin)<=0.0)) then | ^ Warning: ‘origin’ may be used uninitialized [-Wmaybe-uninitialized] inipars.f90:33:41: 33 | integer:: ndim, alc, singular, origin | ^ note: ‘origin’ was declared here gfortran -arch x86_64 -fPIC -Wall -g -O2 -c lmfit.f90 -o lmfit.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c lmfit1.f90 -o lmfit1.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c lmfunc.f90 -o lmfunc.o lmfit.f90:116:35: 116 | diag(i) = hess(i,i) * avgdv | ^ Warning: ‘avgdv’ may be used uninitialized [-Wmaybe-uninitialized] lmfit.f90:43:39: 43 | diag(n2), avgdv | ^ note: ‘avgdv’ was declared here linefit.f90:95:35: 95 | diag(i) = hess(i,i) * avgdv | ^ Warning: ‘avgdv’ may be used uninitialized [-Wmaybe-uninitialized] linefit.f90:32:52: 32 | hess(n2,n2), diag(n2), avgdv | ^ note: ‘avgdv’ was declared here lmfunc.f90:2:23: 2 | iflag,xd,yd,syd,model) | 1 Warning: Unused dummy argument ‘iflag’ at (1) [-Wunused-dummy-argument] lmfit1.f90:78:35: 78 | diag(i) = hess(i,i) * avgdv | ^ Warning: ‘avgdv’ may be used uninitialized [-Wmaybe-uninitialized] lmfit1.f90:39:39: 39 | diag(n2), avgdv,& | ^ note: ‘avgdv’ was declared here gfortran -arch x86_64 -fPIC -Wall -g -O2 -c lmfunc1.f90 -o lmfunc1.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c mcCAM.f90 -o mcCAM.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c mcFMM2.f90 -o mcFMM2.o lmfunc1.f90:1:40: 1 | subroutine lmfunc1(nd,n2,pars,fvec,iflag,& | 1 Warning: Unused dummy argument ‘iflag’ at (1) [-Wunused-dummy-argument] gfortran -arch x86_64 -fPIC -Wall -g -O2 -c mcFMM3.f90 -o mcFMM3.o mcCAM.f90:136:19: 136 | logy=gx0+log(ran) | ^ Warning: ‘gx0’ may be used uninitialized [-Wmaybe-uninitialized] mcCAM.f90:114:30: 114 | real(kind(1.0d0)):: ran, gx0, gx1, logy,& | ^ note: ‘gx0’ was declared here mcCAM.f90:248:10: 248 | if (gx1>=logy) exit | ^ Warning: ‘gx1’ may be used uninitialized [-Wmaybe-uninitialized] mcCAM.f90:114:35: 114 | real(kind(1.0d0)):: ran, gx0, gx1, logy,& | ^ note: ‘gx1’ was declared here mcCAM.f90:223:14: 223 | if (gR<=logy) exit | ^ Warning: ‘gr’ may be used uninitialized [-Wmaybe-uninitialized] mcCAM.f90:115:43: 115 | U, L, R, J, K, gL, gR,& | ^ note: ‘gr’ was declared here mcCAM.f90:206:14: 206 | if (gL<=logy) exit | ^ Warning: ‘gl’ may be used uninitialized [-Wmaybe-uninitialized] mcCAM.f90:115:39: 115 | U, L, R, J, K, gL, gR,& | ^ note: ‘gl’ was declared here mcCAM.f90:173:14: 173 | if (R>=upper) exit | ^ Warning: ‘r’ may be used uninitialized [-Wmaybe-uninitialized] mcCAM.f90:115:29: 115 | U, L, R, J, K, gL, gR,& | ^ note: ‘r’ was declared here mcCAM.f90:158:14: 158 | if (L<=lower) exit | ^ Warning: ‘l’ may be used uninitialized [-Wmaybe-uninitialized] mcCAM.f90:115:26: 115 | U, L, R, J, K, gL, gR,& | ^ note: ‘l’ was declared here gfortran -arch x86_64 -fPIC -Wall -g -O2 -c mcFMM4.f90 -o mcFMM4.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c mcMam3.f90 -o mcMam3.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c mcMam4.f90 -o mcMam4.o mcFMM2.f90:173:19: 173 | logy=gx0+log(ran) | ^ Warning: ‘gx0’ may be used uninitialized [-Wmaybe-uninitialized] mcFMM2.f90:146:30: 146 | real(kind(1.0d0)):: ran, gx0, gx1, logy, U, L, R, J, K, gL, gR,& | ^ note: ‘gx0’ was declared here mcFMM2.f90:282:14: 282 | if (gR<=logy) exit | ^ Warning: ‘gr’ may be used uninitialized [-Wmaybe-uninitialized] mcFMM2.f90:146:64: 146 | real(kind(1.0d0)):: ran, gx0, gx1, logy, U, L, R, J, K, gL, gR,& | ^ note: ‘gr’ was declared here mcMam3.f90:162:19: 162 | logy=gx0+log(ran) | ^ Warning: ‘gx0’ may be used uninitialized [-Wmaybe-uninitialized] mcMam3.f90:138:29: 138 | real(kind(1.0d0))::ran, gx0, gx1, logy, U, L,& | ^ note: ‘gx0’ was declared here mcMam3.f90:287:10: 287 | if (gx1>=logy) exit | ^ Warning: ‘gx1’ may be used uninitialized [-Wmaybe-uninitialized] mcMam3.f90:138:34: 138 | real(kind(1.0d0))::ran, gx0, gx1, logy, U, L,& | ^ note: ‘gx1’ was declared here mcMam3.f90:260:13: 260 | if(gR<=logy) exit | ^ Warning: ‘gr’ may be used uninitialized [-Wmaybe-uninitialized] mcMam3.f90:139:36: 139 | R, J, K, gL, gR, Error2(nED),& | ^ note: ‘gr’ was declared here mcMam3.f90:199:13: 199 | if(gL<=logy) exit | ^ Warning: ‘gl’ may be used uninitialized [-Wmaybe-uninitialized] mcMam3.f90:139:32: 139 | R, J, K, gL, gR, Error2(nED),& | ^ note: ‘gl’ was declared here mcMam4.f90:180:19: 180 | logy=gx0+log(ran) | ^ Warning: ‘gx0’ may be used uninitialized [-Wmaybe-uninitialized] mcMam4.f90:154:30: 154 | real(kind(1.0d0)):: ran, gx0, gx1, logy, U, L,& | ^ note: ‘gx0’ was declared here mcMam4.f90:288:14: 288 | if (gR<=logy) exit | ^ Warning: ‘gr’ may be used uninitialized [-Wmaybe-uninitialized] mcMam4.f90:155:37: 155 | R, J, K, gL, gR, Error2(nED),& | ^ note: ‘gr’ was declared here mcFMM3.f90:201:19: 201 | logy=gx0+log(ran) | ^ Warning: ‘gx0’ may be used uninitialized [-Wmaybe-uninitialized] mcFMM3.f90:171:30: 171 | real(kind(1.0d0)):: ran, gx0, gx1, logy, U, L, R, J, K, gL, gR, locVal,& | ^ note: ‘gx0’ was declared here mcFMM3.f90:382:10: 382 | if (Value>locVal) then | ^ Warning: ‘locval’ may be used uninitialized [-Wmaybe-uninitialized] mcFMM3.f90:171:72: 171 | real(kind(1.0d0)):: ran, gx0, gx1, logy, U, L, R, J, K, gL, gR, locVal,& | ^ note: ‘locval’ was declared here mcFMM3.f90:365:10: 365 | if (gx1>=logy) exit | ^ Warning: ‘gx1’ may be used uninitialized [-Wmaybe-uninitialized] mcFMM3.f90:171:35: 171 | real(kind(1.0d0)):: ran, gx0, gx1, logy, U, L, R, J, K, gL, gR, locVal,& | ^ note: ‘gx1’ was declared here mcFMM3.f90:332:15: 332 | if (gR<=logy) exit | ^ Warning: ‘gr’ may be used uninitialized [-Wmaybe-uninitialized] mcFMM3.f90:171:64: 171 | real(kind(1.0d0)):: ran, gx0, gx1, logy, U, L, R, J, K, gL, gR, locVal,& | ^ note: ‘gr’ was declared here mcFMM3.f90:307:15: 307 | if (gL<=logy) exit | ^ Warning: ‘gl’ may be used uninitialized [-Wmaybe-uninitialized] mcFMM3.f90:171:60: 171 | real(kind(1.0d0)):: ran, gx0, gx1, logy, U, L, R, J, K, gL, gR, locVal,& | ^ note: ‘gl’ was declared here gfortran -arch x86_64 -fPIC -Wall -g -O2 -c minpack.f90 -o minpack.o minpack.f90:982:11: 982 | integer i | 1 Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable] minpack.f90:993:22: 993 | real ( dbdbx ) qnorm | 1 Warning: Unused variable ‘qnorm’ declared at (1) [-Wunused-variable] minpack.f90:1264:11: 1264 | integer i | 1 Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable] minpack.f90:140:11: 140 | integer i | 1 Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable] gfortran -arch x86_64 -fPIC -Wall -g -O2 -c minpack1.f90 -o minpack1.o minpack1.f90:89:11: 89 | integer i | 1 Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable] mcFMM4.f90:231:19: 231 | logy=gx0+log(ran) | ^ Warning: ‘gx0’ may be used uninitialized [-Wmaybe-uninitialized] mcFMM4.f90:197:30: 197 | real(kind(1.0d0)):: ran, gx0, gx1, logy, U, L, R, J, K, gL, gR, locVal,& | ^ note: ‘gx0’ was declared here mcFMM4.f90:442:10: 442 | if (Value>locVal) then | ^ Warning: ‘locval’ may be used uninitialized [-Wmaybe-uninitialized] mcFMM4.f90:197:72: 197 | real(kind(1.0d0)):: ran, gx0, gx1, logy, U, L, R, J, K, gL, gR, locVal,& | ^ note: ‘locval’ was declared here mcFMM4.f90:421:10: 421 | if (gx1>=logy) exit | ^ Warning: ‘gx1’ may be used uninitialized [-Wmaybe-uninitialized] mcFMM4.f90:197:35: 197 | real(kind(1.0d0)):: ran, gx0, gx1, logy, U, L, R, J, K, gL, gR, locVal,& | ^ note: ‘gx1’ was declared here mcFMM4.f90:384:14: 384 | if (gR<=logy) exit | ^ Warning: ‘gr’ may be used uninitialized [-Wmaybe-uninitialized] mcFMM4.f90:197:64: 197 | real(kind(1.0d0)):: ran, gx0, gx1, logy, U, L, R, J, K, gL, gR, locVal,& | ^ note: ‘gr’ was declared here mcFMM4.f90:355:14: 355 | if (gL<=logy) exit | ^ Warning: ‘gl’ may be used uninitialized [-Wmaybe-uninitialized] mcFMM4.f90:197:60: 197 | real(kind(1.0d0)):: ran, gx0, gx1, logy, U, L, R, J, K, gL, gR, locVal,& | ^ note: ‘gl’ was declared here gfortran -arch x86_64 -fPIC -Wall -g -O2 -c norm.f90 -o norm.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c numHess.f90 -o numHess.o numHess.f90:158:23: 158 | integer:: i | 1 Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable] numHess.f90:196:26: 196 | end function func | ^ Warning: ‘__result_func’ may be used uninitialized [-Wmaybe-uninitialized] numHess.f90:154:8: 154 | function func(x) | ^ note: ‘__result_func’ was declared here clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c numOSL_init.c -o numOSL_init.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c pnorm.f90 -o pnorm.o gfortran -arch x86_64 -fPIC -Wall -g -O2 -c targfunc.f90 -o targfunc.o clang -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o numOSL.so apfmmstd.o apmamstd.o calDEXPxm.o calED1.o calED_fort.o calSGCED_fort.o calcSF.o camED.o comb_next.o compED.o decomp_fort.o diffev.o fitGOK.o fitGrowth_fort.o fmmED.o goodComp.o hpSort.o inipars.o interpolate.o inverse_ger.o inverse_sym.o linefit.o lmfit.o lmfit1.o lmfunc.o lmfunc1.o mcCAM.o mcFMM2.o mcFMM3.o mcFMM4.o mcMam3.o mcMam4.o minpack.o minpack1.o norm.o numHess.o numOSL_init.o pnorm.o targfunc.o -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.3/numOSL.Rcheck/00LOCK-numOSL/00new/numOSL/libs ** generating debug symbols (dSYM) ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (numOSL)