* installing *source* package ‘imbibe’ ... ** package ‘imbibe’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using SDK: ‘MacOSX11.3.sdk’ clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DUSING_R -DHAVE_ZLIB -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RNifti/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RNifti_shim.c -o RNifti_shim.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DUSING_R -DHAVE_ZLIB -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RNifti/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c bw.c -o bw.o bw.c:397:9: warning: variable 'm' set but not used [-Wunused-but-set-variable] int m, k; // loop variables ^ bw.c:422:9: warning: variable 'm' set but not used [-Wunused-but-set-variable] int m, k; // loop variables ^ bw.c:654:9: warning: unused variable 'R' [-Wunused-variable] int j, R; ^ bw.c:667:9: warning: unused variable 'R' [-Wunused-variable] int j, R; ^ 4 warnings generated. clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DUSING_R -DHAVE_ZLIB -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RNifti/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c core.c -o core.o clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DUSING_R -DHAVE_ZLIB -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RNifti/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c core32.c -o core32.o core32.c:503:6: warning: unused variable 'top' [-Wunused-variable] int top = nBins - 1; ^ core32.c:2943:6: warning: unused variable 'fv' [-Wunused-variable] flt fv = v; ^ core32.c:2778:12: warning: unused function 'essentiallyEqual' [-Wunused-function] static int essentiallyEqual(float a, float b) { ^ 3 warnings generated. clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DUSING_R -DHAVE_ZLIB -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RNifti/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c core64.c -o core64.o core64.c:503:6: warning: unused variable 'top' [-Wunused-variable] int top = nBins - 1; ^ core64.c:2943:6: warning: unused variable 'fv' [-Wunused-variable] flt fv = v; ^ core64.c:2778:12: warning: unused function 'essentiallyEqual' [-Wunused-function] static int essentiallyEqual(float a, float b) { ^ 3 warnings generated. clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DUSING_R -DHAVE_ZLIB -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RNifti/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c main.cpp -o main.o In file included from main.cpp:3: In file included from ./RNifti_shim.h:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RNifti/include/RNifti.h:50: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RNifti/include/RNifti/NiftiImage.h:333:33: warning: suggest braces around initialization of subobject [-Wmissing-braces] Rcomplex rValue = { value.real(), value.imag() }; ^~~~~~~~~~~~~~~~~~~~~~~~~~ { } main.cpp:12:9: warning: variable 'status' set but not used [-Wunused-but-set-variable] int status = 0; ^ 2 warnings generated. clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DUSING_R -DHAVE_ZLIB -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RNifti/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c tensor.c -o tensor.o tensor.c:1705:14: warning: variable 'nvox' set but not used [-Wunused-but-set-variable] static int nvox , ncall ; ^ tensor.c:1705:21: warning: variable 'ncall' set but not used [-Wunused-but-set-variable] static int nvox , ncall ; ^ 2 warnings generated. clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o imbibe.so RNifti_shim.o bw.o core.o core32.o core64.o main.o tensor.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.3/imbibe.Rcheck/00LOCK-imbibe/00new/imbibe/libs ** generating debug symbols (dSYM) ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (imbibe)