* installing *source* package ‘fishmethods’ ... ** package ‘fishmethods’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c init_dummy_file.cpp -o init_dummy_file.o (cd TMB; /Library/Frameworks/R.framework/Resources/bin/Rscript \ --no-save --no-restore compile.R '') using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include" -I"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_fishmethods_TMBExports -DCPPAD_FRAMEWORK -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fishmethods_TMBExports.cpp -o fishmethods_TMBExports.o In file included from fishmethods_TMBExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/TMB.hpp:87: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from fishmethods_TMBExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/TMB.hpp:87: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseLU:33: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from fishmethods_TMBExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/TMB.hpp:112: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/cppad/cppad.hpp:34: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/cppad/ode_gear.hpp:489:6: warning: variable 'sign' set but not used [-Wunused-but-set-variable] int sign; ^ In file included from fishmethods_TMBExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/TMB.hpp:112: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/cppad/cppad.hpp:39: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/TMB/include/cppad/romberg_mul.hpp:277:10: warning: variable 'pow2' set but not used [-Wunused-but-set-variable] size_t pow2 = 1; ^ 5 warnings generated. clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o fishmethods_TMBExports.so fishmethods_TMBExports.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation [1] TRUE clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o fishmethods.so init_dummy_file.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.3/fishmethods.Rcheck/00LOCK-fishmethods/00new/fishmethods/libs ** generating debug symbols (dSYM) ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fishmethods)