* installing *source* package ‘ctsem’ ... ** package ‘ctsem’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using C++17 using SDK: ‘MacOSX11.3.sdk’ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I/opt/R/x86_64/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I/opt/R/x86_64/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c stanExports_cov.cc -o stanExports_cov.o In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:1: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Core:540: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:2: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/LU:47: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Jacobi:29: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:43: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/QR:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Householder:27: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/QR:48: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SVD:48: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:6: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Geometry:58: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I/opt/R/x86_64/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c stanExports_ctsm.cc -o stanExports_ctsm.o In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:30: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Eigenvalues:58: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:66: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:27: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/OrderingMethods:71: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseCholesky:43: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseLU:33: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:32: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseQR:34: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:33: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/IterativeLinearSolvers:46: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:32: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/CholmodSupport:45: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:35: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:39: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/Polynomials:135: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:40: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/SparseExtra:44: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:239:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:40: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/SparseExtra:51: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"../inst/include" -I"/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include' -I/opt/R/x86_64/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fPIC -falign-functions=64 -Wall -g -O2 -c stanExports_ctsmgen.cc -o stanExports_ctsmgen.o In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:1: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Core:540: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:2: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/LU:47: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Jacobi:29: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:43: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/QR:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Householder:27: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/QR:48: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SVD:48: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:6: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Geometry:58: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Eigenvalues:58: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:66: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:27: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/OrderingMethods:71: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseCholesky:43: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ 22 warnings generated. In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseLU:33: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:32: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseQR:34: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:33: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/IterativeLinearSolvers:46: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:1: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Core:540: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:2: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/LU:47: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Jacobi:29: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:43: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/QR:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Householder:27: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/QR:48: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SVD:48: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:6: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Geometry:58: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Eigenvalues:58: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:66: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:27: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/OrderingMethods:71: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseCholesky:43: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseLU:33: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:32: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseQR:34: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:33: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/IterativeLinearSolvers:46: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:32: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/CholmodSupport:45: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:35: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:39: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/Polynomials:135: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:40: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/SparseExtra:44: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:239:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:1: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Core:540: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:40: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/SparseExtra:51: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:2: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/LU:47: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Jacobi:29: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Cholesky:43: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/QR:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Householder:27: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/QR:48: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SVD:48: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/err.hpp:8: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/err/check_cholesky_factor_corr.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/err/check_unit_vector.hpp:9: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/abs.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/hypot.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/functor/apply_scalar_binary.hpp:9: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/err/check_matching_dims.hpp:33:8: warning: unused variable 'error' [-Wunused-variable] bool error = false; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:6: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Geometry:58: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Dense:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Eigenvalues:58: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/err.hpp:50: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/err/hmm_check.hpp:33:7: warning: unused variable 'n_transitions' [-Wunused-variable] int n_transitions = log_omegas.cols() - 1; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:66: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:27: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/OrderingMethods:71: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseCholesky:43: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseLU:33: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:32: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/CholmodSupport:45: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:32: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseQR:34: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:3: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:33: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/IterativeLinearSolvers:46: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:35: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:39: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/Polynomials:135: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:40: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/SparseExtra:44: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:239:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:40: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/SparseExtra:51: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/err.hpp:8: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/err/check_cholesky_factor_corr.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/err/check_unit_vector.hpp:9: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/abs.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/hypot.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/functor/apply_scalar_binary.hpp:9: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/err/check_matching_dims.hpp:33:8: warning: unused variable 'error' [-Wunused-variable] bool error = false; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/err.hpp:50: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/err/hmm_check.hpp:33:7: warning: unused variable 'n_transitions' [-Wunused-variable] int n_transitions = log_omegas.cols() - 1; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:32: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/CholmodSupport:45: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:35: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:39: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/Polynomials:135: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:40: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/SparseExtra:44: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:239:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/RcppEigenForward.h:40: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/unsupported/Eigen/SparseExtra:51: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas] #pragma clang diagnostic pop ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun.hpp:118: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/gp_matern52_cov.hpp:275:10: warning: unused variable 'neg_root_5' [-Wunused-variable] double neg_root_5 = -root_5; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/err.hpp:8: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/err/check_cholesky_factor_corr.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/err/check_unit_vector.hpp:9: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/abs.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/hypot.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/functor/apply_scalar_binary.hpp:9: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/err/check_matching_dims.hpp:33:8: warning: unused variable 'error' [-Wunused-variable] bool error = false; ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun.hpp:183: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/log_mix.hpp:86:13: warning: unused variable 'N' [-Wunused-variable] const int N = stan::math::size(theta); ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:12: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/err.hpp:50: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/err/hmm_check.hpp:33:7: warning: unused variable 'n_transitions' [-Wunused-variable] int n_transitions = log_omegas.cols() - 1; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun.hpp:118: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/gp_matern52_cov.hpp:275:10: warning: unused variable 'neg_root_5' [-Wunused-variable] double neg_root_5 = -root_5; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun.hpp:183: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/log_mix.hpp:86:13: warning: unused variable 'N' [-Wunused-variable] const int N = stan::math::size(theta); ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun.hpp:118: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/gp_matern52_cov.hpp:275:10: warning: unused variable 'neg_root_5' [-Wunused-variable] double neg_root_5 = -root_5; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun.hpp:183: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/log_mix.hpp:86:13: warning: unused variable 'N' [-Wunused-variable] const int N = stan::math::size(theta); ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:87: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/double_exponential_cdf.hpp:82:10: warning: unused variable 'N' [-Wunused-variable] size_t N = max_size(y, mu, sigma); ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:128: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/gaussian_dlm_obs_rng.hpp:98:7: warning: unused variable 'n' [-Wunused-variable] int n = G.rows(); // number of states ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:139: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/hmm_marginal.hpp:26:13: warning: unused variable 'n_states' [-Wunused-variable] const int n_states = omegas.rows(); ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:87: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/double_exponential_cdf.hpp:82:10: warning: unused variable 'N' [-Wunused-variable] size_t N = max_size(y, mu, sigma); ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:128: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/gaussian_dlm_obs_rng.hpp:98:7: warning: unused variable 'n' [-Wunused-variable] int n = G.rows(); // number of states ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:139: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/hmm_marginal.hpp:26:13: warning: unused variable 'n_states' [-Wunused-variable] const int n_states = omegas.rows(); ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:315: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/std_normal_rng.hpp:23:22: warning: unused variable 'function' [-Wunused-variable] static const char* function = "std_normal_rng"; ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:335: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/von_mises_cdf.hpp:72:10: warning: unused variable 'ck' [-Wunused-variable] double ck = 50; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:87: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/double_exponential_cdf.hpp:82:10: warning: unused variable 'N' [-Wunused-variable] size_t N = max_size(y, mu, sigma); ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:128: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/gaussian_dlm_obs_rng.hpp:98:7: warning: unused variable 'n' [-Wunused-variable] int n = G.rows(); // number of states ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:315: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/std_normal_rng.hpp:23:22: warning: unused variable 'function' [-Wunused-variable] static const char* function = "std_normal_rng"; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:335: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/von_mises_cdf.hpp:72:10: warning: unused variable 'ck' [-Wunused-variable] double ck = 50; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:139: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/hmm_marginal.hpp:26:13: warning: unused variable 'n_states' [-Wunused-variable] const int n_states = omegas.rows(); ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:315: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/std_normal_rng.hpp:23:22: warning: unused variable 'function' [-Wunused-variable] static const char* function = "std_normal_rng"; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:335: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/von_mises_cdf.hpp:72:10: warning: unused variable 'ck' [-Wunused-variable] double ck = 50; ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable] int ret = stan::services::error_codes::CONFIG; ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_header.hpp:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing.hpp:9: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:610:13: warning: unused variable 'cols' [-Wunused-variable] const int cols = rvalue_index_size(idxs.tail_.head_, x_ref.cols()); ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_header.hpp:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing.hpp:10: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:241:22: warning: unused variable 'x_cols' [-Wunused-variable] const Eigen::Index x_cols = x.cols(); ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable] int ret = stan::services::error_codes::CONFIG; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_header.hpp:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing.hpp:9: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:610:13: warning: unused variable 'cols' [-Wunused-variable] const int cols = rvalue_index_size(idxs.tail_.head_, x_ref.cols()); ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_header.hpp:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing.hpp:10: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:241:22: warning: unused variable 'x_cols' [-Wunused-variable] const Eigen::Index x_cols = x.cols(); ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable] int ret = stan::services::error_codes::CONFIG; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_header.hpp:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing.hpp:9: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:610:13: warning: unused variable 'cols' [-Wunused-variable] const int cols = rvalue_index_size(idxs.tail_.head_, x_ref.cols()); ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_header.hpp:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing.hpp:10: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:241:22: warning: unused variable 'x_cols' [-Wunused-variable] const Eigen::Index x_cols = x.cols(); ^ In file included from stanExports_ctsm.cc:5: ./stanExports_ctsm.h:8247:16: warning: variable 'prevtime' set but not used [-Wunused-but-set-variable] double prevtime; ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:29: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:88:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture] [avi = a.vi_, b](const auto& vi) mutable { ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_minus_equal.hpp:24:16: note: in instantiation of function template specialization 'stan::math::operator-' requested here vi_ = (*this - b).vi_; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/core/complex_base.hpp:136:9: note: in instantiation of member function 'stan::math::var_value::operator-=' requested here re_ -= x; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:24:5: note: in instantiation of function template specialization 'stan::math::complex_base>::operator-=' requested here y -= rhs; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:55:20: note: in instantiation of function template specialization 'stan::math::internal::complex_subtract, int>' requested here return internal::complex_subtract(x, y); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/acosh.hpp:105:31: note: in instantiation of function template specialization 'stan::math::operator-, int>' requested here auto y = log(z + sqrt(z * z - 1)); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun/acosh.hpp:94:32: note: in instantiation of function template specialization 'stan::math::internal::complex_acosh>' requested here return stan::math::internal::complex_acosh(z); ^ In file included from stanExports_ctsmgen.cc:5: ./stanExports_ctsmgen.h:5572:18: warning: variable 'prevtime' set but not used [-Wunused-but-set-variable] double prevtime; ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:28: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture] [avi = a.vi_, b](const auto& vi) mutable { ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun/grad_inc_beta.hpp:45:43: note: in instantiation of function template specialization 'stan::math::operator+' requested here grad_2F1(dF1, dF2, a + b, var(1.0), a + 1, z); ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:28: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture] [avi = a.vi_, b](const auto& vi) mutable { ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/trigamma.hpp:63:31: note: in instantiation of function template specialization 'stan::math::operator+' requested here value = -trigamma_impl(-x + 1.0) + square(pi() / sin(-pi() * x)); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun/trigamma.hpp:23:44: note: in instantiation of function template specialization 'stan::math::trigamma_impl>' requested here inline var trigamma(const var& u) { return trigamma_impl(u); } ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:29: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:88:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture] [avi = a.vi_, b](const auto& vi) mutable { ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_minus_equal.hpp:24:16: note: in instantiation of function template specialization 'stan::math::operator-' requested here vi_ = (*this - b).vi_; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/core/complex_base.hpp:136:9: note: in instantiation of member function 'stan::math::var_value::operator-=' requested here re_ -= x; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:24:5: note: in instantiation of function template specialization 'stan::math::complex_base>::operator-=' requested here y -= rhs; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:55:20: note: in instantiation of function template specialization 'stan::math::internal::complex_subtract, int>' requested here return internal::complex_subtract(x, y); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/acosh.hpp:105:31: note: in instantiation of function template specialization 'stan::math::operator-, int>' requested here auto y = log(z + sqrt(z * z - 1)); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun/acosh.hpp:94:32: note: in instantiation of function template specialization 'stan::math::internal::complex_acosh>' requested here return stan::math::internal::complex_acosh(z); ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_header.hpp:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing.hpp:9: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable] const auto v_size = v.size(); ^ ./stanExports_cov.h:809:15: note: in instantiation of function template specialization 'stan::model::rvalue &, nullptr>' requested here rvalue(mu, ^ ./stanExports_cov.h:1111:7: note: in instantiation of function template specialization 'model_cov_namespace::model_cov::write_array_impl, boost::random::linear_congruential_engine>, std::vector, std::vector, std::vector, nullptr, nullptr, nullptr>' requested here write_array_impl(base_rng, params_r, params_i, vars, emit_transformed_parameters, emit_generated_quantities, pstream); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/random_var_context.hpp:77:11: note: in instantiation of function template specialization 'model_cov_namespace::model_cov::write_array, boost::random::linear_congruential_engine>>' requested here model.write_array(rng, unconstrained_params_, int_params, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/util/initialize.hpp:93:36: note: in instantiation of function template specialization 'stan::io::random_var_context::random_var_context, boost::random::linear_congruential_engine>>' requested here stan::io::random_var_context random_context(model, rng, init_radius, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here std::vector cont_vector = util::initialize( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here return_code = stan::services::diagnose::diagnose(model, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here ret = command(args, model_, holder, names_oi_tidx_, ^ stanExports_cov.cc:15:87: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here .method("call_sampler", &rstan::stan_fit ::call_sampler) ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:29: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:88:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture] [avi = a.vi_, b](const auto& vi) mutable { ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_minus_equal.hpp:24:16: note: in instantiation of function template specialization 'stan::math::operator-' requested here vi_ = (*this - b).vi_; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/core/complex_base.hpp:136:9: note: in instantiation of member function 'stan::math::var_value::operator-=' requested here re_ -= x; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:24:5: note: in instantiation of function template specialization 'stan::math::complex_base>::operator-=' requested here y -= rhs; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:55:20: note: in instantiation of function template specialization 'stan::math::internal::complex_subtract, int>' requested here return internal::complex_subtract(x, y); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/acosh.hpp:105:31: note: in instantiation of function template specialization 'stan::math::operator-, int>' requested here auto y = log(z + sqrt(z * z - 1)); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun/acosh.hpp:94:32: note: in instantiation of function template specialization 'stan::math::internal::complex_acosh>' requested here return stan::math::internal::complex_acosh(z); ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:52: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:83:59: warning: lambda capture 'this' is not used [-Wunused-lambda-capture] container_operands_(index_apply([&, this](auto... Is) { ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/functor/operands_and_partials.hpp:167:16: note: in instantiation of function template specialization 'stan::math::precomputed_gradients_vari_template<>::precomputed_gradients_vari_template<>' requested here return new precomputed_gradients_vari_template< ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:113:23: note: in instantiation of member function 'stan::math::operands_and_partials, -1, 1, 0> &, const stan::math::var_value &, const int &, double, double, stan::math::var_value>::build' requested here return ops_partials.build(logp); ^ ./stanExports_cov.h:597:17: note: in instantiation of function template specialization 'stan::math::normal_lpdf, -1, 1, 0>, stan::math::var_value, int, nullptr>' requested here sdprior = normal_lpdf(logsd, mean(logsd), 10); ^ ./stanExports_cov.h:1123:14: note: in instantiation of function template specialization 'model_cov_namespace::model_cov::log_prob_impl>, std::vector, nullptr, nullptr>' requested here return log_prob_impl(params_r, params_i, pstream); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_cov_namespace::model_cov::log_prob>' requested here var adLogProb = model.template log_prob( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here log_prob = stan::model::log_prob_grad( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here std::vector cont_vector = util::initialize( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here return_code = stan::services::diagnose::diagnose(model, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here ret = command(args, model_, holder, names_oi_tidx_, ^ stanExports_cov.cc:15:87: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here .method("call_sampler", &rstan::stan_fit ::call_sampler) ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:52: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:86:60: warning: lambda capture 'this' is not used [-Wunused-lambda-capture] container_gradients_(index_apply([&, this](auto... Is) { ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:29: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:88:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture] [avi = a.vi_, b](const auto& vi) mutable { ^ ./stanExports_cov.h:305:40: note: in instantiation of function template specialization 'stan::math::operator-' requested here r3 = ((stan::math::abs(r2) / r1) - 1); ^ ./stanExports_cov.h:609:22: note: in instantiation of function template specialization 'model_cov_namespace::constraincorsqrt, -1, 1, 0>>' requested here tcrossprod(constraincorsqrt(rawcor, d, pstream__)), ^ ./stanExports_cov.h:1123:14: note: in instantiation of function template specialization 'model_cov_namespace::model_cov::log_prob_impl>, std::vector, nullptr, nullptr>' requested here return log_prob_impl(params_r, params_i, pstream); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_cov_namespace::model_cov::log_prob>' requested here var adLogProb = model.template log_prob( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here log_prob = stan::model::log_prob_grad( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here std::vector cont_vector = util::initialize( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here return_code = stan::services::diagnose::diagnose(model, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here ret = command(args, model_, holder, names_oi_tidx_, ^ stanExports_cov.cc:15:87: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here .method("call_sampler", &rstan::stan_fit ::call_sampler) ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:29: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture] [bvi = b.vi_, a](const auto& vi) mutable { ^ ./stanExports_cov.h:341:15: note: in instantiation of function template specialization 'stan::math::operator-' requested here ((1 - ^ ./stanExports_cov.h:609:22: note: in instantiation of function template specialization 'model_cov_namespace::constraincorsqrt, -1, 1, 0>>' requested here tcrossprod(constraincorsqrt(rawcor, d, pstream__)), ^ ./stanExports_cov.h:1123:14: note: in instantiation of function template specialization 'model_cov_namespace::model_cov::log_prob_impl>, std::vector, nullptr, nullptr>' requested here return log_prob_impl(params_r, params_i, pstream); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_cov_namespace::model_cov::log_prob>' requested here var adLogProb = model.template log_prob( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here log_prob = stan::model::log_prob_grad( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here std::vector cont_vector = util::initialize( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here return_code = stan::services::diagnose::diagnose(model, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here ret = command(args, model_, holder, names_oi_tidx_, ^ stanExports_cov.cc:15:87: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here .method("call_sampler", &rstan::stan_fit ::call_sampler) ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:28: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture] [avi = a.vi_, b](const auto& vi) mutable { ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun/grad_inc_beta.hpp:45:43: note: in instantiation of function template specialization 'stan::math::operator+' requested here grad_2F1(dF1, dF2, a + b, var(1.0), a + 1, z); ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_header.hpp:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing.hpp:9: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable] const auto v_size = v.size(); ^ ./stanExports_cov.h:650:15: note: in instantiation of function template specialization 'stan::model::rvalue, -1, 1, 0> &, nullptr>' requested here rvalue(mu, ^ ./stanExports_cov.h:1123:14: note: in instantiation of function template specialization 'model_cov_namespace::model_cov::log_prob_impl>, std::vector, nullptr, nullptr>' requested here return log_prob_impl(params_r, params_i, pstream); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_cov_namespace::model_cov::log_prob>' requested here var adLogProb = model.template log_prob( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here log_prob = stan::model::log_prob_grad( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here std::vector cont_vector = util::initialize( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here return_code = stan::services::diagnose::diagnose(model, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here ret = command(args, model_, holder, names_oi_tidx_, ^ stanExports_cov.cc:15:87: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here .method("call_sampler", &rstan::stan_fit ::call_sampler) ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:28: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture] [avi = a.vi_, b](const auto& vi) mutable { ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/trigamma.hpp:63:31: note: in instantiation of function template specialization 'stan::math::operator+' requested here value = -trigamma_impl(-x + 1.0) + square(pi() / sin(-pi() * x)); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun/trigamma.hpp:23:44: note: in instantiation of function template specialization 'stan::math::trigamma_impl>' requested here inline var trigamma(const var& u) { return trigamma_impl(u); } ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:29: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture] [bvi = b.vi_, a](const auto& vi) mutable { ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/functors/BinaryFunctors.h:332:128: note: in instantiation of function template specialization 'stan::math::operator-' requested here EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type operator() (const LhsScalar& a, const RhsScalar& b) const { return a - b; } ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:719:12: note: in instantiation of member function 'Eigen::internal::scalar_difference_op>::operator()' requested here return m_functor(m_lhsImpl.coeff(index), m_rhsImpl.coeff(index)); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:637:56: note: in instantiation of member function 'Eigen::internal::binary_evaluator>, const Eigen::Transpose>, const Eigen::Matrix, -1, 1, 0>>, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, stan::math::var_value>::coeff' requested here m_functor.assignCoeff(m_dst.coeffRef(index), m_src.coeff(index)); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:497:14: note: in instantiation of member function 'Eigen::internal::generic_dense_assignment_kernel, -1, 1, 0>, 0>>, Eigen::internal::evaluator>, const Eigen::Transpose>, const Eigen::Matrix, -1, 1, 0>>>, Eigen::internal::assign_op, stan::math::var_value>, 0>::assignCoeff' requested here kernel.assignCoeff(i); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:741:34: note: in instantiation of member function 'Eigen::internal::dense_assignment_loop, -1, 1, 0>, 0>>, Eigen::internal::evaluator>, const Eigen::Transpose>, const Eigen::Matrix, -1, 1, 0>>>, Eigen::internal::assign_op, stan::math::var_value>, 0>, 1, 0>::run' requested here dense_assignment_loop::run(kernel); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:5: note: (skipping 13 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all) call_dense_assignment_loop(dst, src, func); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here log_prob = stan::model::log_prob_grad( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here std::vector cont_vector = util::initialize( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here return_code = stan::services::diagnose::diagnose(model, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here ret = command(args, model_, holder, names_oi_tidx_, ^ stanExports_cov.cc:15:87: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here .method("call_sampler", &rstan::stan_fit ::call_sampler) ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:28: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture] [avi = a.vi_, b](const auto& vi) mutable { ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun/grad_inc_beta.hpp:45:43: note: in instantiation of function template specialization 'stan::math::operator+' requested here grad_2F1(dF1, dF2, a + b, var(1.0), a + 1, z); ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:28: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture] [avi = a.vi_, b](const auto& vi) mutable { ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/trigamma.hpp:63:31: note: in instantiation of function template specialization 'stan::math::operator+' requested here value = -trigamma_impl(-x + 1.0) + square(pi() / sin(-pi() * x)); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun/trigamma.hpp:23:44: note: in instantiation of function template specialization 'stan::math::trigamma_impl>' requested here inline var trigamma(const var& u) { return trigamma_impl(u); } ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_header.hpp:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing.hpp:9: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable] const auto v_size = v.size(); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:761:12: note: in instantiation of function template specialization 'stan::model::rvalue, nullptr>' requested here return rvalue(std::move(v[idxs.head_.n_ - 1]), idxs.tail_, name, depth + 1); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable] const auto v_size = v.size(); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:763:12: note: in instantiation of function template specialization 'stan::model::rvalue &, nullptr>' requested here return rvalue(v[idxs.head_.n_ - 1], idxs.tail_, name, depth + 1); ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_header.hpp:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing.hpp:9: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable] const auto v_size = v.size(); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:761:12: note: in instantiation of function template specialization 'stan::model::rvalue, nullptr>' requested here return rvalue(std::move(v[idxs.head_.n_ - 1]), idxs.tail_, name, depth + 1); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable] const auto v_size = v.size(); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:763:12: note: in instantiation of function template specialization 'stan::model::rvalue &, nullptr>' requested here return rvalue(v[idxs.head_.n_ - 1], idxs.tail_, name, depth + 1); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable] const auto v_size = v.size(); ^ ./stanExports_ctsm.h:8805:23: note: in instantiation of function template specialization 'stan::model::rvalue &, nullptr>' requested here rvalue(rawindparams, ^ ./stanExports_ctsm.h:13045:7: note: in instantiation of function template specialization 'model_ctsm_namespace::model_ctsm::write_array_impl, boost::random::linear_congruential_engine>, std::vector, std::vector, std::vector, nullptr, nullptr, nullptr>' requested here write_array_impl(base_rng, params_r, params_i, vars, emit_transformed_parameters, emit_generated_quantities, pstream); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/random_var_context.hpp:77:11: note: in instantiation of function template specialization 'model_ctsm_namespace::model_ctsm::write_array, boost::random::linear_congruential_engine>>' requested here model.write_array(rng, unconstrained_params_, int_params, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/util/initialize.hpp:93:36: note: in instantiation of function template specialization 'stan::io::random_var_context::random_var_context, boost::random::linear_congruential_engine>>' requested here stan::io::random_var_context random_context(model, rng, init_radius, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here std::vector cont_vector = util::initialize( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here return_code = stan::services::diagnose::diagnose(model, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here ret = command(args, model_, holder, names_oi_tidx_, ^ stanExports_ctsm.cc:15:87: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here .method("call_sampler", &rstan::stan_fit ::call_sampler) ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:59: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: 'static' function 'set_zero_all_adjoints' declared in header file should be declared 'static inline' [-Wunneeded-internal-declaration] static void set_zero_all_adjoints() { ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun.hpp:110: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/generalized_inverse.hpp:34:9: warning: unused type alias 'value_t' [-Wunused-local-typedef] using value_t = value_type_t; ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun.hpp:319: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/tail.hpp:46:9: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = index_type_t>; ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_lpmf.hpp:59:9: warning: unused type alias 'T_y_val' [-Wunused-local-typedef] using T_y_val = ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/beta_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/beta_lpdf.hpp:50:9: warning: unused type alias 'T_partials_matrix' [-Wunused-local-typedef] using T_partials_matrix = Eigen::Matrix; ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:37: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/beta_proportion_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/beta_proportion_lpdf.hpp:55:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef] using T_partials_array = Eigen::Array; ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:63: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/cauchy_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/cauchy_lpdf.hpp:45:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef] using T_partials_array = Eigen::Array; ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:74: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/dirichlet_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/dirichlet_lpdf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef] using T_partials_vec = typename Eigen::Matrix; ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:91: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/double_exponential_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/double_exponential_lpdf.hpp:44:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef] using T_partials_array = Eigen::Array; ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:111: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/frechet_cdf.hpp:30:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef] using T_partials_array = Eigen::Array; ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:245: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/ordered_logistic_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/ordered_logistic_lpmf.hpp:76:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef] using T_partials_array = Eigen::Array; ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:277: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_lpmf.hpp:62:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef] using T_alpha_val = typename std::conditional_t< ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:49: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun.hpp:32: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun/cholesky_decompose.hpp:83:11: warning: unused type alias 'Block_' [-Wunused-local-typedef] using Block_ = Eigen::Block; ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:49: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun.hpp:34: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun/cholesky_factor_constrain.hpp:32:9: warning: unused type alias 'T_scalar' [-Wunused-local-typedef] using T_scalar = value_type_t; ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:49: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun.hpp:71: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun/generalized_inverse.hpp:64:9: warning: unused type alias 'value_t' [-Wunused-local-typedef] using value_t = value_type_t; ^ In file included from stanExports_cov.cc:5: In file included from ./stanExports_cov.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_header.hpp:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing.hpp:8: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/lvalue_varmat.hpp:349:9: warning: unused type alias 'pair_type' [-Wunused-local-typedef] using pair_type = std::pair; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_header.hpp:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing.hpp:9: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable] const auto v_size = v.size(); ^ ./stanExports_ctsm.h:9691:27: note: in instantiation of function template specialization 'stan::model::rvalue &, nullptr>' requested here rvalue(state, ^ ./stanExports_ctsm.h:13045:7: note: in instantiation of function template specialization 'model_ctsm_namespace::model_ctsm::write_array_impl, boost::random::linear_congruential_engine>, std::vector, std::vector, std::vector, nullptr, nullptr, nullptr>' requested here write_array_impl(base_rng, params_r, params_i, vars, emit_transformed_parameters, emit_generated_quantities, pstream); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/random_var_context.hpp:77:11: note: in instantiation of function template specialization 'model_ctsm_namespace::model_ctsm::write_array, boost::random::linear_congruential_engine>>' requested here model.write_array(rng, unconstrained_params_, int_params, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/util/initialize.hpp:93:36: note: in instantiation of function template specialization 'stan::io::random_var_context::random_var_context, boost::random::linear_congruential_engine>>' requested here stan::io::random_var_context random_context(model, rng, init_radius, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here std::vector cont_vector = util::initialize( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here return_code = stan::services::diagnose::diagnose(model, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here ret = command(args, model_, holder, names_oi_tidx_, ^ stanExports_ctsm.cc:15:87: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here .method("call_sampler", &rstan::stan_fit ::call_sampler) ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_header.hpp:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing.hpp:9: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable] const auto v_size = v.size(); ^ ./stanExports_ctsm.h:9800:25: note: in instantiation of function template specialization 'stan::model::rvalue, nullptr>' requested here rvalue( ^ ./stanExports_ctsm.h:13045:7: note: in instantiation of function template specialization 'model_ctsm_namespace::model_ctsm::write_array_impl, boost::random::linear_congruential_engine>, std::vector, std::vector, std::vector, nullptr, nullptr, nullptr>' requested here write_array_impl(base_rng, params_r, params_i, vars, emit_transformed_parameters, emit_generated_quantities, pstream); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/random_var_context.hpp:77:11: note: in instantiation of function template specialization 'model_ctsm_namespace::model_ctsm::write_array, boost::random::linear_congruential_engine>>' requested here model.write_array(rng, unconstrained_params_, int_params, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/util/initialize.hpp:93:36: note: in instantiation of function template specialization 'stan::io::random_var_context::random_var_context, boost::random::linear_congruential_engine>>' requested here stan::io::random_var_context random_context(model, rng, init_radius, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here std::vector cont_vector = util::initialize( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here return_code = stan::services::diagnose::diagnose(model, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here ret = command(args, model_, holder, names_oi_tidx_, ^ stanExports_ctsm.cc:15:87: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here .method("call_sampler", &rstan::stan_fit ::call_sampler) ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable] const auto v_size = v.size(); ^ ./stanExports_ctsmgen.h:7021:29: note: in instantiation of function template specialization 'stan::model::rvalue &, nullptr>' requested here rvalue(state, ^ ./stanExports_ctsmgen.h:9796:7: note: in instantiation of function template specialization 'model_ctsmgen_namespace::model_ctsmgen::write_array_impl, boost::random::linear_congruential_engine>, std::vector, std::vector, std::vector, nullptr, nullptr, nullptr>' requested here write_array_impl(base_rng, params_r, params_i, vars, emit_transformed_parameters, emit_generated_quantities, pstream); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/random_var_context.hpp:77:11: note: in instantiation of function template specialization 'model_ctsmgen_namespace::model_ctsmgen::write_array, boost::random::linear_congruential_engine>>' requested here model.write_array(rng, unconstrained_params_, int_params, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/util/initialize.hpp:93:36: note: in instantiation of function template specialization 'stan::io::random_var_context::random_var_context, boost::random::linear_congruential_engine>>' requested here stan::io::random_var_context random_context(model, rng, init_radius, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here std::vector cont_vector = util::initialize( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here return_code = stan::services::diagnose::diagnose(model, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here ret = command(args, model_, holder, names_oi_tidx_, ^ stanExports_ctsmgen.cc:15:87: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here .method("call_sampler", &rstan::stan_fit ::call_sampler) ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:29: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:88:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture] [avi = a.vi_, b](const auto& vi) mutable { ^ ./stanExports_ctsmgen.h:4633:63: note: in instantiation of function template specialization 'stan::math::operator-' requested here ((((nsubjects * 1.0) / nsubsets) * (subset - 1)) + 1)); ^ ./stanExports_ctsmgen.h:9808:14: note: in instantiation of function template specialization 'model_ctsmgen_namespace::model_ctsmgen::log_prob_impl>, std::vector, nullptr, nullptr>' requested here return log_prob_impl(params_r, params_i, pstream); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_ctsmgen_namespace::model_ctsmgen::log_prob>' requested here var adLogProb = model.template log_prob( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here log_prob = stan::model::log_prob_grad( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here std::vector cont_vector = util::initialize( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here return_code = stan::services::diagnose::diagnose(model, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here ret = command(args, model_, holder, names_oi_tidx_, ^ stanExports_ctsmgen.cc:15:87: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here .method("call_sampler", &rstan::stan_fit ::call_sampler) ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:29: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture] [bvi = b.vi_, a](const auto& vi) mutable { ^ ./stanExports_ctsmgen.h:1515:15: note: in instantiation of function template specialization 'stan::math::operator-' requested here ((1 - ^ ./stanExports_ctsmgen.h:4743:22: note: in instantiation of function template specialization 'model_ctsmgen_namespace::constraincorsqrt, -1, -1, 0>>' requested here tcrossprod(constraincorsqrt(rawpopcovbase, pstream__)), ^ ./stanExports_ctsmgen.h:9808:14: note: in instantiation of function template specialization 'model_ctsmgen_namespace::model_ctsmgen::log_prob_impl>, std::vector, nullptr, nullptr>' requested here return log_prob_impl(params_r, params_i, pstream); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_ctsmgen_namespace::model_ctsmgen::log_prob>' requested here var adLogProb = model.template log_prob( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here log_prob = stan::model::log_prob_grad( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here std::vector cont_vector = util::initialize( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here return_code = stan::services::diagnose::diagnose(model, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here ret = command(args, model_, holder, names_oi_tidx_, ^ stanExports_ctsmgen.cc:15:87: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here .method("call_sampler", &rstan::stan_fit ::call_sampler) ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:52: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:83:59: warning: lambda capture 'this' is not used [-Wunused-lambda-capture] container_operands_(index_apply([&, this](auto... Is) { ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/functor/operands_and_partials.hpp:167:16: note: in instantiation of function template specialization 'stan::math::precomputed_gradients_vari_template<>::precomputed_gradients_vari_template<>' requested here return new precomputed_gradients_vari_template< ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/multi_normal_cholesky_lpdf.hpp:161:23: note: in instantiation of member function 'stan::math::operands_and_partials, -1, 1, 0>> &, Eigen::Matrix, const Eigen::Matrix &, double, double, stan::math::var_value>::build' requested here return ops_partials.build(logp); ^ ./stanExports_ctsmgen.h:4767:13: note: in instantiation of function template specialization 'stan::math::multi_normal_cholesky_lpdf, -1, 1, 0>>, Eigen::CwiseNullaryOp, Eigen::Matrix>, Eigen::Matrix>' requested here multi_normal_cholesky_lpdf(baseindparams, ^ ./stanExports_ctsmgen.h:9808:14: note: in instantiation of function template specialization 'model_ctsmgen_namespace::model_ctsmgen::log_prob_impl>, std::vector, nullptr, nullptr>' requested here return log_prob_impl(params_r, params_i, pstream); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_ctsmgen_namespace::model_ctsmgen::log_prob>' requested here var adLogProb = model.template log_prob( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here log_prob = stan::model::log_prob_grad( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here std::vector cont_vector = util::initialize( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here return_code = stan::services::diagnose::diagnose(model, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here ret = command(args, model_, holder, names_oi_tidx_, ^ stanExports_ctsmgen.cc:15:87: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here .method("call_sampler", &rstan::stan_fit ::call_sampler) ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:52: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:86:60: warning: lambda capture 'this' is not used [-Wunused-lambda-capture] container_gradients_(index_apply([&, this](auto... Is) { ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:59: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: 'static' function 'set_zero_all_adjoints' declared in header file should be declared 'static inline' [-Wunneeded-internal-declaration] static void set_zero_all_adjoints() { ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun.hpp:110: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/generalized_inverse.hpp:34:9: warning: unused type alias 'value_t' [-Wunused-local-typedef] using value_t = value_type_t; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun.hpp:319: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/tail.hpp:46:9: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = index_type_t>; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_lpmf.hpp:59:9: warning: unused type alias 'T_y_val' [-Wunused-local-typedef] using T_y_val = ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/beta_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/beta_lpdf.hpp:50:9: warning: unused type alias 'T_partials_matrix' [-Wunused-local-typedef] using T_partials_matrix = Eigen::Matrix; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:37: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/beta_proportion_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/beta_proportion_lpdf.hpp:55:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef] using T_partials_array = Eigen::Array; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:63: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/cauchy_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/cauchy_lpdf.hpp:45:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef] using T_partials_array = Eigen::Array; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:74: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/dirichlet_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/dirichlet_lpdf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef] using T_partials_vec = typename Eigen::Matrix; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:91: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/double_exponential_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/double_exponential_lpdf.hpp:44:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef] using T_partials_array = Eigen::Array; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:111: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/frechet_cdf.hpp:30:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef] using T_partials_array = Eigen::Array; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:245: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/ordered_logistic_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/ordered_logistic_lpmf.hpp:76:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef] using T_partials_array = Eigen::Array; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:277: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_lpmf.hpp:62:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef] using T_alpha_val = typename std::conditional_t< ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:49: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun.hpp:32: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun/cholesky_decompose.hpp:83:11: warning: unused type alias 'Block_' [-Wunused-local-typedef] using Block_ = Eigen::Block; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:49: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun.hpp:34: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun/cholesky_factor_constrain.hpp:32:9: warning: unused type alias 'T_scalar' [-Wunused-local-typedef] using T_scalar = value_type_t; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:49: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun.hpp:71: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun/generalized_inverse.hpp:64:9: warning: unused type alias 'value_t' [-Wunused-local-typedef] using value_t = value_type_t; ^ In file included from stanExports_ctsmgen.cc:5: In file included from ./stanExports_ctsmgen.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_header.hpp:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing.hpp:8: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/lvalue_varmat.hpp:349:9: warning: unused type alias 'pair_type' [-Wunused-local-typedef] using pair_type = std::pair; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:29: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:88:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture] [avi = a.vi_, b](const auto& vi) mutable { ^ ./stanExports_ctsm.h:4677:63: note: in instantiation of function template specialization 'stan::math::operator-' requested here ((((nsubjects * 1.0) / nsubsets) * (subset - 1)) + 1)); ^ ./stanExports_ctsm.h:13057:14: note: in instantiation of function template specialization 'model_ctsm_namespace::model_ctsm::log_prob_impl>, std::vector, nullptr, nullptr>' requested here return log_prob_impl(params_r, params_i, pstream); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_ctsm_namespace::model_ctsm::log_prob>' requested here var adLogProb = model.template log_prob( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here log_prob = stan::model::log_prob_grad( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here std::vector cont_vector = util::initialize( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here return_code = stan::services::diagnose::diagnose(model, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here ret = command(args, model_, holder, names_oi_tidx_, ^ stanExports_ctsm.cc:15:87: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here .method("call_sampler", &rstan::stan_fit ::call_sampler) ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:29: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture] [bvi = b.vi_, a](const auto& vi) mutable { ^ ./stanExports_ctsm.h:1544:15: note: in instantiation of function template specialization 'stan::math::operator-' requested here ((1 - ^ ./stanExports_ctsm.h:4940:22: note: in instantiation of function template specialization 'model_ctsm_namespace::constraincorsqrt, -1, -1, 0>>' requested here tcrossprod(constraincorsqrt(rawpopcovbase, pstream__)), ^ ./stanExports_ctsm.h:13057:14: note: in instantiation of function template specialization 'model_ctsm_namespace::model_ctsm::log_prob_impl>, std::vector, nullptr, nullptr>' requested here return log_prob_impl(params_r, params_i, pstream); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_ctsm_namespace::model_ctsm::log_prob>' requested here var adLogProb = model.template log_prob( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here log_prob = stan::model::log_prob_grad( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here std::vector cont_vector = util::initialize( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here return_code = stan::services::diagnose::diagnose(model, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here ret = command(args, model_, holder, names_oi_tidx_, ^ stanExports_ctsm.cc:15:87: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here .method("call_sampler", &rstan::stan_fit ::call_sampler) ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_header.hpp:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing.hpp:9: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable] const auto v_size = v.size(); ^ ./stanExports_ctsm.h:5535:23: note: in instantiation of function template specialization 'stan::model::rvalue, -1, 1, 0> &, nullptr>' requested here rvalue(rawindparams, ^ ./stanExports_ctsm.h:13057:14: note: in instantiation of function template specialization 'model_ctsm_namespace::model_ctsm::log_prob_impl>, std::vector, nullptr, nullptr>' requested here return log_prob_impl(params_r, params_i, pstream); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_ctsm_namespace::model_ctsm::log_prob>' requested here var adLogProb = model.template log_prob( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here log_prob = stan::model::log_prob_grad( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here std::vector cont_vector = util::initialize( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here return_code = stan::services::diagnose::diagnose(model, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here ret = command(args, model_, holder, names_oi_tidx_, ^ stanExports_ctsm.cc:15:87: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here .method("call_sampler", &rstan::stan_fit ::call_sampler) ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_header.hpp:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing.hpp:9: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable] const auto v_size = v.size(); ^ ./stanExports_ctsm.h:6421:27: note: in instantiation of function template specialization 'stan::model::rvalue, 1, -1, 1> &, nullptr>' requested here rvalue(state, ^ ./stanExports_ctsm.h:13057:14: note: in instantiation of function template specialization 'model_ctsm_namespace::model_ctsm::log_prob_impl>, std::vector, nullptr, nullptr>' requested here return log_prob_impl(params_r, params_i, pstream); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_ctsm_namespace::model_ctsm::log_prob>' requested here var adLogProb = model.template log_prob( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here log_prob = stan::model::log_prob_grad( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here std::vector cont_vector = util::initialize( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here return_code = stan::services::diagnose::diagnose(model, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here ret = command(args, model_, holder, names_oi_tidx_, ^ stanExports_ctsm.cc:15:87: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here .method("call_sampler", &rstan::stan_fit ::call_sampler) ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_header.hpp:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing.hpp:9: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable] const auto v_size = v.size(); ^ ./stanExports_ctsm.h:6530:25: note: in instantiation of function template specialization 'stan::model::rvalue, -1, 1, 0>, nullptr>' requested here rvalue( ^ ./stanExports_ctsm.h:13057:14: note: in instantiation of function template specialization 'model_ctsm_namespace::model_ctsm::log_prob_impl>, std::vector, nullptr, nullptr>' requested here return log_prob_impl(params_r, params_i, pstream); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_ctsm_namespace::model_ctsm::log_prob>' requested here var adLogProb = model.template log_prob( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here log_prob = stan::model::log_prob_grad( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here std::vector cont_vector = util::initialize( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here return_code = stan::services::diagnose::diagnose(model, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here ret = command(args, model_, holder, names_oi_tidx_, ^ stanExports_ctsm.cc:15:87: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here .method("call_sampler", &rstan::stan_fit ::call_sampler) ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:52: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:83:59: warning: lambda capture 'this' is not used [-Wunused-lambda-capture] container_operands_(index_apply([&, this](auto... Is) { ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/functor/operands_and_partials.hpp:167:16: note: in instantiation of function template specialization 'stan::math::precomputed_gradients_vari_template<>::precomputed_gradients_vari_template<>' requested here return new precomputed_gradients_vari_template< ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/multi_normal_cholesky_lpdf.hpp:161:23: note: in instantiation of member function 'stan::math::operands_and_partials &, const Eigen::Matrix, -1, 1, 0> &, const Eigen::Matrix, -1, -1, 0> &, double, double, stan::math::var_value>::build' requested here return ops_partials.build(logp); ^ ./stanExports_ctsm.h:7125:21: note: in instantiation of function template specialization 'stan::math::multi_normal_cholesky_lpdf, Eigen::Matrix, -1, 1, 0>, Eigen::Matrix, -1, -1, 0>>' requested here multi_normal_cholesky_lpdf( ^ ./stanExports_ctsm.h:13057:14: note: in instantiation of function template specialization 'model_ctsm_namespace::model_ctsm::log_prob_impl>, std::vector, nullptr, nullptr>' requested here return log_prob_impl(params_r, params_i, pstream); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_ctsm_namespace::model_ctsm::log_prob>' requested here var adLogProb = model.template log_prob( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad' requested here log_prob = stan::model::log_prob_grad( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize, boost::random::linear_congruential_engine>>' requested here std::vector cont_vector = util::initialize( ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose' requested here return_code = stan::services::diagnose::diagnose(model, ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command, boost::random::linear_congruential_engine>>' requested here ret = command(args, model_, holder, names_oi_tidx_, ^ stanExports_ctsm.cc:15:87: note: in instantiation of member function 'rstan::stan_fit, boost::random::linear_congruential_engine>>::call_sampler' requested here .method("call_sampler", &rstan::stan_fit ::call_sampler) ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:52: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:86:60: warning: lambda capture 'this' is not used [-Wunused-lambda-capture] container_gradients_(index_apply([&, this](auto... Is) { ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:48: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_base.hpp:5: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core.hpp:59: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: 'static' function 'set_zero_all_adjoints' declared in header file should be declared 'static inline' [-Wunneeded-internal-declaration] static void set_zero_all_adjoints() { ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun.hpp:110: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/generalized_inverse.hpp:34:9: warning: unused type alias 'value_t' [-Wunused-local-typedef] using value_t = value_type_t; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:14: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun.hpp:319: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/fun/tail.hpp:46:9: warning: unused type alias 'idx_t' [-Wunused-local-typedef] using idx_t = index_type_t>; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_lpmf.hpp:59:9: warning: unused type alias 'T_y_val' [-Wunused-local-typedef] using T_y_val = ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/beta_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/beta_lpdf.hpp:50:9: warning: unused type alias 'T_partials_matrix' [-Wunused-local-typedef] using T_partials_matrix = Eigen::Matrix; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:37: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/beta_proportion_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/beta_proportion_lpdf.hpp:55:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef] using T_partials_array = Eigen::Array; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:63: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/cauchy_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/cauchy_lpdf.hpp:45:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef] using T_partials_array = Eigen::Array; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:74: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/dirichlet_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/dirichlet_lpdf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef] using T_partials_vec = typename Eigen::Matrix; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:91: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/double_exponential_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/double_exponential_lpdf.hpp:44:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef] using T_partials_array = Eigen::Array; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:111: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/frechet_cdf.hpp:30:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef] using T_partials_array = Eigen::Array; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:245: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/ordered_logistic_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/ordered_logistic_lpmf.hpp:76:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef] using T_partials_array = Eigen::Array; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:43: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/io/dump.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim.hpp:16: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob.hpp:277: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_log.hpp:5: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_lpmf.hpp:62:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef] using T_alpha_val = typename std::conditional_t< ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:49: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun.hpp:32: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun/cholesky_decompose.hpp:83:11: warning: unused type alias 'Block_' [-Wunused-local-typedef] using Block_ = Eigen::Block; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:49: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun.hpp:34: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun/cholesky_factor_constrain.hpp:32:9: warning: unused type alias 'T_scalar' [-Wunused-local-typedef] using T_scalar = value_type_t; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:23: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/rstaninc.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/rstan/include/rstan/stan_fit.hpp:49: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/test_gradients.hpp:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev.hpp:10: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun.hpp:71: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/stan/math/rev/fun/generalized_inverse.hpp:64:9: warning: unused type alias 'value_t' [-Wunused-local-typedef] using value_t = value_type_t; ^ In file included from stanExports_ctsm.cc:5: In file included from ./stanExports_ctsm.h:25: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/model_header.hpp:15: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing.hpp:8: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/StanHeaders/include/src/stan/model/indexing/lvalue_varmat.hpp:349:9: warning: unused type alias 'pair_type' [-Wunused-local-typedef] using pair_type = std::pair; ^ 60 warnings generated. 61 warnings generated. 66 warnings generated. clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o ctsem.so RcppExports.o stanExports_cov.o stanExports_ctsm.o stanExports_ctsmgen.o -L/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/lib/ -Wl,-rpath,/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppParallel/lib/ -ltbb -ltbbmalloc -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.3/ctsem.Rcheck/00LOCK-ctsem/00new/ctsem/libs ** generating debug symbols (dSYM) ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ctsem)