* installing *source* package ‘covafillr’ ... ** package ‘covafillr’ successfully unpacked and MD5 sums checked ** using staged installation checking for pkg-config... /opt/R/x86_64/bin/pkg-config configure: Installing without JAGS configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/jags.cpp config.status: creating R/zzz.R ** libs using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I/opt/R/x86_64/include -I../inst/include -fPIC -falign-functions=64 -Wall -g -O2 -c jags.cpp -o jags.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include' -I/opt/R/x86_64/include -I../inst/include -fPIC -falign-functions=64 -Wall -g -O2 -c main.cpp -o main.o In file included from main.cpp:7: In file included from ../inst/include/covafill/Core:36: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from main.cpp:7: In file included from ../inst/include/covafill/Core:36: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/Sparse:31: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/SparseLU:33: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from main.cpp:7: In file included from ../inst/include/covafill/Core:44: ../inst/include/covafill/src/Core/covafill_operators.hpp:137:7: warning: variable 'NnotZero' set but not used [-Wunused-but-set-variable] int NnotZero = 0; ^ 4 warnings generated. clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o covafillr.so jags.o main.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation /Volumes/Builds/packages/big-sur-x86_64/results/4.3/covafillr.Rcheck/00_pkg_src/covafillr/src/jags.o: no symbols installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.3/covafillr.Rcheck/00LOCK-covafillr/00new/covafillr/libs ** generating debug symbols (dSYM) ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (covafillr)