* installing *source* package ‘bigtabulate’ ... ** package ‘bigtabulate’ successfully unpacked and MD5 sums checked ** using staged installation checking for Sun Studio compiler... no checking for OS... Darwin ** libs using C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/bigmemory/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c bigtabulate.cpp -o bigtabulate.o In file included from bigtabulate.cpp:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/shared_ptr.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/detail/shared_count.hpp:27: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/detail/sp_counted_impl.hpp:27: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/core/checked_delete.hpp:36:5: warning: delete called on non-final 'BreakMapper' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor] delete x; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/detail/shared_count.hpp:154:20: note: in instantiation of function template specialization 'boost::checked_delete>' requested here boost::checked_delete( p ); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:279:5: note: in instantiation of function template specialization 'boost::detail::shared_count::shared_count>' requested here boost::detail::shared_count( p ).swap( pn ); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:373:24: note: in instantiation of function template specialization 'boost::detail::sp_pointer_construct, BreakMapper>' requested here boost::detail::sp_pointer_construct( this, p, pn ); ^ bigtabulate.cpp:438:26: note: in instantiation of function template specialization 'boost::shared_ptr>::shared_ptr>' requested here mappers.push_back( MapperPtr( ^ bigtabulate.cpp:772:10: note: in instantiation of function template specialization 'TAPPLY>' requested here return TAPPLY( MatrixAccessor( REAL(numericMatrix), ^ In file included from bigtabulate.cpp:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/shared_ptr.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/detail/shared_count.hpp:27: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/detail/sp_counted_impl.hpp:27: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/core/checked_delete.hpp:36:5: warning: delete called on non-final 'IndexMapper' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor] delete x; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/detail/shared_count.hpp:154:20: note: in instantiation of function template specialization 'boost::checked_delete>' requested here boost::checked_delete( p ); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:279:5: note: in instantiation of function template specialization 'boost::detail::shared_count::shared_count>' requested here boost::detail::shared_count( p ).swap( pn ); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:373:24: note: in instantiation of function template specialization 'boost::detail::sp_pointer_construct, IndexMapper>' requested here boost::detail::sp_pointer_construct( this, p, pn ); ^ bigtabulate.cpp:445:26: note: in instantiation of function template specialization 'boost::shared_ptr>::shared_ptr>' requested here mappers.push_back( MapperPtr( ^ bigtabulate.cpp:772:10: note: in instantiation of function template specialization 'TAPPLY>' requested here return TAPPLY( MatrixAccessor( REAL(numericMatrix), ^ In file included from bigtabulate.cpp:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/shared_ptr.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/detail/shared_count.hpp:27: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/detail/sp_counted_impl.hpp:27: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/core/checked_delete.hpp:36:5: warning: delete called on non-final 'BreakMapper' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor] delete x; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/detail/shared_count.hpp:154:20: note: in instantiation of function template specialization 'boost::checked_delete>' requested here boost::checked_delete( p ); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:279:5: note: in instantiation of function template specialization 'boost::detail::shared_count::shared_count>' requested here boost::detail::shared_count( p ).swap( pn ); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:373:24: note: in instantiation of function template specialization 'boost::detail::sp_pointer_construct, BreakMapper>' requested here boost::detail::sp_pointer_construct( this, p, pn ); ^ bigtabulate.cpp:438:26: note: in instantiation of function template specialization 'boost::shared_ptr>::shared_ptr>' requested here mappers.push_back( MapperPtr( ^ bigtabulate.cpp:782:10: note: in instantiation of function template specialization 'TAPPLY>' requested here return TAPPLY( MatrixAccessor( INTEGER(numericMatrix), ^ In file included from bigtabulate.cpp:7: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/shared_ptr.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:17: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/detail/shared_count.hpp:27: In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/detail/sp_counted_impl.hpp:27: /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/core/checked_delete.hpp:36:5: warning: delete called on non-final 'IndexMapper' that has virtual functions but non-virtual destructor [-Wdelete-non-abstract-non-virtual-dtor] delete x; ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/detail/shared_count.hpp:154:20: note: in instantiation of function template specialization 'boost::checked_delete>' requested here boost::checked_delete( p ); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:279:5: note: in instantiation of function template specialization 'boost::detail::shared_count::shared_count>' requested here boost::detail::shared_count( p ).swap( pn ); ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include/boost/smart_ptr/shared_ptr.hpp:373:24: note: in instantiation of function template specialization 'boost::detail::sp_pointer_construct, IndexMapper>' requested here boost::detail::sp_pointer_construct( this, p, pn ); ^ bigtabulate.cpp:445:26: note: in instantiation of function template specialization 'boost::shared_ptr>::shared_ptr>' requested here mappers.push_back( MapperPtr( ^ bigtabulate.cpp:782:10: note: in instantiation of function template specialization 'TAPPLY>' requested here return TAPPLY( MatrixAccessor( INTEGER(numericMatrix), ^ 4 warnings generated. clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/BH/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/bigmemory/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c bigtabulate_init.c -o bigtabulate_init.o clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o bigtabulate.so bigtabulate.o bigtabulate_init.o -DDARWIN -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.3/bigtabulate.Rcheck/00LOCK-bigtabulate/00new/bigtabulate/libs ** generating debug symbols (dSYM) ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bigtabulate)