* using log directory ‘/Volumes/Builds/packages/big-sur-x86_64/results/4.3/RMark.Rcheck’
* using R version 4.3.0 RC (2023-04-13 r84266)
* using platform: x86_64-apple-darwin20 (64-bit)
* R was compiled by
    Apple clang version 14.0.3 (clang-1403.0.22.14.1)
    GNU Fortran (GCC) 12.2.0
* running under: macOS Ventura 13.3
* using session charset: UTF-8
* checking for file ‘RMark/DESCRIPTION’ ... OK
* this is package ‘RMark’ version ‘3.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘RMark’ can be installed ... [11s/29s] WARNING
Found the following significant warnings:
  Warning: Software mark not found in path.
See 'https://www.r-project.org/nosvn/R.check/r-oldrel-macos-x86_64/RMark-00install.html' for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [1s/4s] OK
* checking whether the package can be loaded with stated dependencies ... [1s/3s] OK
* checking whether the package can be unloaded cleanly ... [1s/3s] OK
* checking whether the namespace can be loaded with stated dependencies ... [1s/3s] OK
* checking whether the namespace can be unloaded cleanly ... [1s/3s] OK
* checking loading without being on the library search path ... [1s/3s] OK
* checking startup messages can be suppressed ... [1s/3s] NOTE
Warning: Software mark not found in path.
         If you have mark executable, you will need to set MarkPath object to its location (e.g. MarkPath="C:/Users/Jeff Laake/Desktop"

It looks like this package (or a package it requires) has a startup
message which cannot be suppressed: see ?packageStartupMessage.
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [16s/45s] OK
* checking Rd files ... [1s/2s] OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [0s/1s] OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [2s/4s] ERROR
Running examples in ‘RMark-Ex.R’ failed
The error most likely occurred in:

> ### Name: Blackduck
> ### Title: Black duck known fate data
> ### Aliases: Blackduck
> ### Keywords: datasets
> 
> ### ** Examples
> 
> 
> data(Blackduck)
> # Change BirdAge to numeric; starting with version 1.6.3 factor variables are
> # no longer allowed.  They can work as in this example but they can be misleading
> # and fail if the levels are non-numeric.  The real parameters will remain 
> # unchanged but the betas will be different.
> Blackduck$BirdAge=as.numeric(Blackduck$BirdAge)-1
> run.Blackduck=function()
+ {
+ #
+ # Process data
+ #
+ bduck.processed=process.data(Blackduck,model="Known")
+ #
+ # Create default design data
+ #
+ bduck.ddl=make.design.data(bduck.processed)
+ #
+ #  Add occasion specific data min < 0; I have no idea what it is
+ #
+ bduck.ddl$S$min=c(4,6,7,7,7,6,5,5)
+ #
+ #  Define range of models for S
+ #
+ S.dot=list(formula=~1)
+ S.time=list(formula=~time)
+ S.min=list(formula=~min)
+ S.BirdAge=list(formula=~BirdAge)
+ #
+ # Note that in the following model in the MARK example, the covariates
+ # have been standardized.  That means that the beta parameters will be different
+ # for BirdAge, Weight and their interaction but the likelihood and real parameter
+ # estimates are the same.
+ #
+ S.BirdAgexWeight.min=list(formula=~min+BirdAge*Weight)
+ S.BirdAge.Weight=list(formula=~BirdAge+Weight)
+ #
+ # Create model list and run assortment of models
+ #
+ model.list=create.model.list("Known")
+ bduck.results=mark.wrapper(model.list,data=bduck.processed,ddl=bduck.ddl,
+                invisible=FALSE,threads=1,delete=TRUE)
+ 
+ #
+ # Return model table and list of models
+ #
+ return(bduck.results)
+ }
> bduck.results=run.Blackduck()

S.BirdAge

sh: mark: command not found
Warning in system(paste("mark i=", inputfile, " o=", outfile, " v=", vcvfile,  :
  error in running command
Error in run.mark.model(model, invisible = invisible, adjust = adjust,  : 
  
Output file does not exist. Unable to find or run mark.exe


S.BirdAge.Weight

sh: mark: command not found
Warning in system(paste("mark i=", inputfile, " o=", outfile, " v=", vcvfile,  :
  error in running command
Error in run.mark.model(model, invisible = invisible, adjust = adjust,  : 
  
Output file does not exist. Unable to find or run mark.exe


S.BirdAgexWeight.min

sh: mark: command not found
Warning in system(paste("mark i=", inputfile, " o=", outfile, " v=", vcvfile,  :
  error in running command
Error in run.mark.model(model, invisible = invisible, adjust = adjust,  : 
  
Output file does not exist. Unable to find or run mark.exe


S.dot

sh: mark: command not found
Warning in system(paste("mark i=", inputfile, " o=", outfile, " v=", vcvfile,  :
  error in running command
Error in run.mark.model(model, invisible = invisible, adjust = adjust,  : 
  
Output file does not exist. Unable to find or run mark.exe


S.min

sh: mark: command not found
Warning in system(paste("mark i=", inputfile, " o=", outfile, " v=", vcvfile,  :
  error in running command
Error in run.mark.model(model, invisible = invisible, adjust = adjust,  : 
  
Output file does not exist. Unable to find or run mark.exe


S.time

sh: mark: command not found
Warning in system(paste("mark i=", inputfile, " o=", outfile, " v=", vcvfile,  :
  error in running command
Error in run.mark.model(model, invisible = invisible, adjust = adjust,  : 
  
Output file does not exist. Unable to find or run mark.exe


No mark models found

Error in collect.models() : 
Calls: run.Blackduck -> mark.wrapper -> collect.models
Execution halted
* checking PDF version of manual ... [11s/28s] OK
* DONE
Status: 1 ERROR, 1 WARNING, 1 NOTE
* using check arguments '--no-clean-on-error '

* elapsed time (check, wall clock): 3:46