* installing *source* package ‘NAIR’ ... ** package ‘NAIR’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I/opt/R/x86_64/include -DARMA_64BIT_WORD=1 -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I/opt/R/x86_64/include -DARMA_64BIT_WORD=1 -fPIC -falign-functions=64 -Wall -g -O2 -c dropDegreeZero.cpp -o dropDegreeZero.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I/opt/R/x86_64/include -DARMA_64BIT_WORD=1 -fPIC -falign-functions=64 -Wall -g -O2 -c hamAdjacencyMatSparse.cpp -o hamAdjacencyMatSparse.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I/opt/R/x86_64/include -DARMA_64BIT_WORD=1 -fPIC -falign-functions=64 -Wall -g -O2 -c hamDistBounded.cpp -o hamDistBounded.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I/opt/R/x86_64/include -DARMA_64BIT_WORD=1 -fPIC -falign-functions=64 -Wall -g -O2 -c levAdjacencyMatSparse.cpp -o levAdjacencyMatSparse.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I/opt/R/x86_64/include -DARMA_64BIT_WORD=1 -fPIC -falign-functions=64 -Wall -g -O2 -c levDistBounded.cpp -o levDistBounded.o In file included from levAdjacencyMatSparse.cpp:20: ./dropDegreeZero.h:4:9: warning: 'ARMA_64BIT_WORD' macro redefined [-Wmacro-redefined] #define ARMA_64BIT_WORD 1 ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include/armadillo_bits/compiler_setup.hpp:88:11: note: previous definition is here #define ARMA_64BIT_WORD ^ In file included from hamAdjacencyMatSparse.cpp:20: ./dropDegreeZero.h:4:9: warning: 'ARMA_64BIT_WORD' macro redefined [-Wmacro-redefined] #define ARMA_64BIT_WORD 1 ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include/armadillo_bits/compiler_setup.hpp:88:11: note: previous definition is here #define ARMA_64BIT_WORD ^ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I/opt/R/x86_64/include -DARMA_64BIT_WORD=1 -fPIC -falign-functions=64 -Wall -g -O2 -c patternAdjacencyMatSparse.cpp -o patternAdjacencyMatSparse.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include' -I/opt/R/x86_64/include -DARMA_64BIT_WORD=1 -fPIC -falign-functions=64 -Wall -g -O2 -c sortAdjacencyMatSparse.cpp -o sortAdjacencyMatSparse.o 1 warning generated. 1 warning generated. In file included from sortAdjacencyMatSparse.cpp:24: ./dropDegreeZero.h:4:9: warning: 'ARMA_64BIT_WORD' macro redefined [-Wmacro-redefined] #define ARMA_64BIT_WORD 1 ^ /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.3/RcppArmadillo/include/armadillo_bits/compiler_setup.hpp:88:11: note: previous definition is here #define ARMA_64BIT_WORD ^ 1 warning generated. clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o NAIR.so RcppExports.o dropDegreeZero.o hamAdjacencyMatSparse.o hamDistBounded.o levAdjacencyMatSparse.o levDistBounded.o patternAdjacencyMatSparse.o sortAdjacencyMatSparse.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.3/NAIR.Rcheck/00LOCK-NAIR/00new/NAIR/libs ** generating debug symbols (dSYM) ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (NAIR)